Literature DB >> 16768446

Unusual entropy-driven affinity of Chromobacterium violaceum lectin CV-IIL toward fucose and mannose.

Martina Pokorná1, Gianluca Cioci, Stephanie Perret, Etienne Rebuffet, Nikola Kostlánová, Jan Adam, Nechama Gilboa-Garber, Edward P Mitchell, Anne Imberty, Michaela Wimmerová.   

Abstract

The purple pigmented bacterium Chromobacterium violaceum is a dominant component of tropical soil microbiota that can cause rare but fatal septicaemia in humans. Its sequenced genome provides insight into the abundant potential of this organism for biotechnological and pharmaceutical applications and allowed an ORF encoding a protein that is 60% identical to the fucose binding lectin (PA-IIL) from Pseudomonas aeruginosa and the mannose binding lectin (RS-IIL) from Ralstonia solanacearum to be identified. The lectin, CV-IIL, has recently been purified from C. violaceum [Zinger-Yosovich, K., Sudakevitz, D., Imberty, A., Garber, N. C., and Gilboa-Garber, N. (2006) Microbiology 152, 457-463] and has been confirmed to be a tetramer with subunit size of 11.86 kDa and a binding preference for fucose. We describe here the cloning of CV-IIL and its expression as a recombinant protein. A complete structure-function characterization has been made in an effort to analyze the specificity and affinity of CV-IIL for fucose and mannose. Crystal structures of CV-IIL complexes with monosaccharides have yielded the molecular basis of the specificity. Each monomer contains two close calcium cations that mediate the binding of the monosaccharides, which occurs in different orientations for fucose and mannose. The thermodynamics of binding has been analyzed by titration microcalorimetry, giving dissociation constants of 1.7 and 19 microM for alpha-methyl fucoside and alpha-methyl mannoside, respectively. Further analysis demonstrated a strongly favorable entropy term that is unusual in carbohydrate binding. A comparison with both PA-IIL and RS-IIL, which have binding preferences for fucose and mannose, respectively, yielded insights into the monosaccharide specificity of this important class of soluble bacterial lectins.

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Year:  2006        PMID: 16768446     DOI: 10.1021/bi060214e

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  7 in total

1.  Engineering the Pseudomonas aeruginosa II lectin: designing mutants with changed affinity and specificity.

Authors:  Zdeněk Kříž; Jan Adam; Jana Mrázková; Petros Zotos; Thomais Chatzipavlou; Michaela Wimmerová; Jaroslav Koča
Journal:  J Comput Aided Mol Des       Date:  2014-07-12       Impact factor: 3.686

Review 2.  Biofilm Matrix Proteins.

Authors:  Jiunn N C Fong; Fitnat H Yildiz
Journal:  Microbiol Spectr       Date:  2015-04

3.  Burkholderia cenocepacia BC2L-C is a super lectin with dual specificity and proinflammatory activity.

Authors:  Ondřej Sulák; Gianluca Cioci; Emilie Lameignère; Viviane Balloy; Adam Round; Irina Gutsche; Lenka Malinovská; Michel Chignard; Paul Kosma; Daniel F Aubert; Cristina L Marolda; Miguel A Valvano; Michaela Wimmerová; Anne Imberty
Journal:  PLoS Pathog       Date:  2011-09-01       Impact factor: 6.823

4.  BacterialLectinDb: An integrated bacterial lectin database.

Authors:  Dharmendra Kumar; Yashoda Mittal
Journal:  Bioinformation       Date:  2012-03-31

5.  Neutron crystallography reveals mechanisms used by Pseudomonas aeruginosa for host-cell binding.

Authors:  Lukas Gajdos; Matthew P Blakeley; Michael Haertlein; V Trevor Forsyth; Juliette M Devos; Anne Imberty
Journal:  Nat Commun       Date:  2022-01-11       Impact factor: 17.694

Review 6.  Structural Considerations for Building Synthetic Glycoconjugates as Inhibitors for Pseudomonas aeruginosa Lectins.

Authors:  Karolina Wojtczak; Joseph P Byrne
Journal:  ChemMedChem       Date:  2022-05-03       Impact factor: 3.540

7.  Engineering of PA-IIL lectin from Pseudomonas aeruginosa - Unravelling the role of the specificity loop for sugar preference.

Authors:  Jan Adam; Martina Pokorná; Charles Sabin; Edward P Mitchell; Anne Imberty; Michaela Wimmerová
Journal:  BMC Struct Biol       Date:  2007-06-01
  7 in total

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