Literature DB >> 16765450

Reverse correlation of rapid calcium signals in the zebrafish optic tectum in vivo.

Pavan Ramdya1, Bettina Reiter, Florian Engert.   

Abstract

Reverse correlation techniques provide a quantitative means of computing neuronal input/output relationships. Until now these methods have been limited to electrically recorded responses since unprocessed optical signals generally lack necessary temporal characteristics. We sought to overcome this barrier since combining reverse correlation with calcium imaging would afford a powerful alternative to current methods of measuring response properties of neurons non-invasively in vivo. We labeled zebrafish optic tecta with a calcium indicator and measured responses to a whole-field random flicker light stimulus. Although calcium signals exhibited slow decay kinetics, we could use computational modeling to show that the positive differential of these traces extracts high frequency information. Experimentally, we found that calcium signals processed in this way were synchronous with simultaneously measured synaptic responses and could be used with reverse correlation to determine temporal filters of neurons in the zebrafish optic tectum. These findings demonstrate that calcium responses to physiological stimulation can be processed to obtain rapid signal information and consequently to determine linear filter properties in vivo.

Entities:  

Mesh:

Year:  2006        PMID: 16765450     DOI: 10.1016/j.jneumeth.2006.04.021

Source DB:  PubMed          Journal:  J Neurosci Methods        ISSN: 0165-0270            Impact factor:   2.390


  15 in total

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5.  Theoretical analysis of reverse-time correlation for idealized orientation tuning dynamics.

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7.  Nonlinearity of two-photon Ca2+ imaging yields distorted measurements of tuning for V1 neuronal populations.

Authors:  Ian Nauhaus; Kristina J Nielsen; Edward M Callaway
Journal:  J Neurophysiol       Date:  2011-11-23       Impact factor: 2.714

8.  In vivo single-cell excitability probing of neuronal ensembles in the intact and awake developing Xenopus brain.

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Journal:  Nat Protoc       Date:  2010-04-08       Impact factor: 13.491

9.  Mapping and cracking sensorimotor circuits in genetic model organisms.

Authors:  Damon A Clark; Limor Freifeld; Thomas R Clandinin
Journal:  Neuron       Date:  2013-05-22       Impact factor: 17.173

10.  The cellular architecture of the larval zebrafish tectum, as revealed by gal4 enhancer trap lines.

Authors:  Ethan K Scott; Herwig Baier
Journal:  Front Neural Circuits       Date:  2009-10-09       Impact factor: 3.492

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