Literature DB >> 16758448

The proteome of Mannheimia succiniciproducens, a capnophilic rumen bacterium.

Jeong Wook Lee1, Sang Yup Lee, Hyohak Song, Jong-Shin Yoo.   

Abstract

Mannheimia succiniciproducens MBEL55E isolated from bovine rumen is an industrially important bacterium as an efficient succinic acid producer. Recently, its full genome sequence was determined. In the present study, we analyzed the M. succiniciproducens proteome based on the genome information using 2-DE and MS. We established proteome reference map of M. succiniciproducens by analyzing whole cellular proteins, membrane proteins, and secreted proteins. More than 200 proteins were identified and characterized by MS/MS supported by various bioinformatic tools. The presence of proteins previously annotated as hypothetical proteins or proteins having putative functions were also confirmed. Based on the proteome reference map, cells in the different growth phases were analyzed at the proteome level. Comparative proteome profiling revealed valuable information to understand physiological changes during growth, and subsequently suggested target genes to be manipulated for the strain improvement.

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Year:  2006        PMID: 16758448     DOI: 10.1002/pmic.200500837

Source DB:  PubMed          Journal:  Proteomics        ISSN: 1615-9853            Impact factor:   3.984


  9 in total

1.  Extracellular proteome of Aspergillus terreus grown on different carbon sources.

Authors:  Mee-Jung Han; Nag-Jong Kim; Sang Yup Lee; Ho Nam Chang
Journal:  Curr Genet       Date:  2010-06-08       Impact factor: 3.886

Review 2.  Succinate production in Escherichia coli.

Authors:  Chandresh Thakker; Irene Martínez; Ka-Yiu San; George N Bennett
Journal:  Biotechnol J       Date:  2011-09-20       Impact factor: 4.677

3.  Mannheimia succiniciproducens phosphotransferase system for sucrose utilization.

Authors:  Jeong Wook Lee; Sol Choi; Ji Mahn Kim; Sang Yup Lee
Journal:  Appl Environ Microbiol       Date:  2010-01-15       Impact factor: 4.792

4.  Construction and characterization of shuttle vectors for succinic acid-producing rumen bacteria.

Authors:  Yu-Sin Jang; Young Ryul Jung; Sang Yup Lee; Ji Mahn Kim; Jeong Wook Lee; Doo-Byoung Oh; Hyun Ah Kang; Ohsuk Kwon; Seh Hee Jang; Hyohak Song; Sang Jun Lee; Kyu Young Kang
Journal:  Appl Environ Microbiol       Date:  2007-07-06       Impact factor: 4.792

5.  Comparative multi-omics systems analysis of Escherichia coli strains B and K-12.

Authors:  Sung Ho Yoon; Mee-Jung Han; Haeyoung Jeong; Choong Hoon Lee; Xiao-Xia Xia; Dae-Hee Lee; Ji Hoon Shim; Sang Yup Lee; Tae Kwang Oh; Jihyun F Kim
Journal:  Genome Biol       Date:  2012-05-25       Impact factor: 13.583

6.  In silico and microarray-based genomic approaches to identifying potential vaccine candidates against Leptospira interrogans.

Authors:  Hong-Liang Yang; Yong-Zhang Zhu; Jin-Hong Qin; Ping He; Xu-Cheng Jiang; Guo-Ping Zhao; Xiao-Kui Guo
Journal:  BMC Genomics       Date:  2006-11-16       Impact factor: 3.969

7.  Transcriptome and proteome analyses of adaptive responses to methyl methanesulfonate in Escherichia coli K-12 and ada mutant strains.

Authors:  Jong Hwan Baek; Mee-Jung Han; Sang Yup Lee; Jong-Shin Yoo
Journal:  BMC Microbiol       Date:  2009-09-03       Impact factor: 3.605

8.  Identification of a mimotope for circulating anti-cytokeratin 8/18 antibody and its usage for the diagnosis of breast cancer.

Authors:  Chang-Kyu Heo; Hai-Min Hwang; Ah Ruem; Dae-Yeul Yu; Ju Yeon Lee; Jong Shin Yoo; In Gyu Kim; Hyang Sook Yoo; Sejeong Oh; Jeong Heon Ko; Eun-Wie Cho
Journal:  Int J Oncol       Date:  2012-10-26       Impact factor: 5.650

9.  Proteome-level responses of Escherichia coli to long-chain fatty acids and use of fatty acid inducible promoter in protein production.

Authors:  Mee-Jung Han; Jeong Wook Lee; Sang Yup Lee; Jong Shin Yoo
Journal:  J Biomed Biotechnol       Date:  2008
  9 in total

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