Literature DB >> 16751333

Cell-based screening and validation of human novel genes associated with cell viability.

Lan Wang1, Xia Gao, Peng Gao, Weiwei Deng, Peng Yu, Jinjing Ma, Jinhai Guo, Xinyu Wang, Hualing Cheng, Chenying Zhang, Chuanfei Yu, Xi Ma, Bingfeng Lv, Yang Lu, Taiping Shi, Dalong Ma.   

Abstract

In the present study, a cell-based high-throughput assay is established to identify novel human genes associated with cell viability. The assay relies on the down-regulation of Renilla luciferase (pRL) activity in a 96-well format. In addition, 2-color fluorescence probes were used to distinguish living and dead cells. As the positive control, the authors used the expression vectors encoding Bax, TNFRSF1A, and TAJ, which were widely known to effectively induce programmed cell death. They screened 409 novel genes (including alternative mRNA splicing forms) cloned in their laboratory and found that 39 genes could significantly down-regulate pRL activity. A subsequent fluorescence-based assay revealed that 4 of the 39 genes (PIP5KL1, OLFM1, RNF122, FAM26B) were associated with cell viability. Further function assays validated that the 4 genes were able to induce both necrosis and apoptosis. These results therefore indicate that a rapid and effective screening system has been developed, which should shed light on some functions of novel genes.

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Year:  2006        PMID: 16751333     DOI: 10.1177/1087057106286654

Source DB:  PubMed          Journal:  J Biomol Screen        ISSN: 1087-0571


  6 in total

1.  CCDC134 is down-regulated in gastric cancer and its silencing promotes cell migration and invasion of GES-1 and AGS cells via the MAPK pathway.

Authors:  Jialing Zhong; Mei Zhao; Qing Luo; Yiming Ma; Jian Liu; Jia Wang; Mei Yang; Xinghua Yuan; Jianli Sang; Changzhi Huang
Journal:  Mol Cell Biochem       Date:  2012-08-18       Impact factor: 3.396

2.  Overexpression of PIP5KL1 suppresses cell proliferation and migration in human gastric cancer cells.

Authors:  Lan Shi; Mei Zhao; Qing Luo; Yi-Ming Ma; Jia-Ling Zhong; Xing-Hua Yuan; Chang-Zhi Huang
Journal:  Mol Biol Rep       Date:  2009-08-13       Impact factor: 2.316

3.  RNF122: a novel ubiquitin ligase associated with calcium-modulating cyclophilin ligand.

Authors:  Zhi Peng; Taiping Shi; Dalong Ma
Journal:  BMC Cell Biol       Date:  2010-06-17       Impact factor: 4.241

4.  Regeneration Enhances Metastasis: A Novel Role for Neurovascular Signaling in Promoting Melanoma Brain Metastasis.

Authors:  Roshini Prakash; Sivan Izraely; Nikita S Thareja; Rex H Lee; Maya Rappaport; Riki Kawaguchi; Orit Sagi-Assif; Shlomit Ben-Menachem; Tsipi Meshel; Michal Machnicki; Shuichi Ohe; Dave S Hoon; Giovanni Coppola; Isaac P Witz; S Thomas Carmichael
Journal:  Front Neurosci       Date:  2019-04-09       Impact factor: 4.677

5.  High-throughput cell-based screening reveals a role for ZNF131 as a repressor of ERalpha signaling.

Authors:  Xiao Han; Jinhai Guo; Weiwei Deng; Chenying Zhang; Peige Du; Taiping Shi; Dalong Ma
Journal:  BMC Genomics       Date:  2008-10-11       Impact factor: 3.969

6.  Transmembrane protein 106A is silenced by promoter region hypermethylation and suppresses gastric cancer growth by inducing apoptosis.

Authors:  Dong Xu; Liujing Qu; Jia Hu; Ge Li; Ping Lv; Dalong Ma; Mingzhou Guo; Yingyu Chen
Journal:  J Cell Mol Med       Date:  2014-06-28       Impact factor: 5.310

  6 in total

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