Literature DB >> 16738106

Reclassification of Roseobacter gallaeciensis Ruiz-Ponte et al. 1998 as Phaeobacter gallaeciensis gen. nov., comb. nov., description of Phaeobacter inhibens sp. nov., reclassification of Ruegeria algicola (Lafay et al. 1995) Uchino et al. 1999 as Marinovum algicola gen. nov., comb. nov., and emended descriptions of the genera Roseobacter, Ruegeria and Leisingera.

Torben Martens1, Thorsten Heidorn2, Rüdiger Pukall3, Meinhard Simon1, Brian J Tindall3, Thorsten Brinkhoff1.   

Abstract

A heterotrophic, antibiotic-producing bacterium, strain T5(T), was isolated from the German Wadden Sea, located in the southern region of the North Sea. Sequence analysis of the 16S rRNA gene of this strain demonstrated close affiliation with Roseobacter gallaeciensis BS107(T) (99 % similarity), but the results of genotypic (DNA-DNA hybridization and DNA G + C content) and phenotypic characterization revealed that strain T5(T) represents a novel species. The novel organism is strictly aerobic, Gram-negative, rod-shaped, motile and forms brown-pigmented colonies. Strain T5(T) produces the antibiotic tropodithietic acid throughout the exponential phase which inhibits the growth of bacteria from different taxa, as well as marine algae. Strain T5(T) requires sodium ions and utilizes a wide range of substrates, including oligosaccharides, sugar alcohols, organic acids and amino acids. The DNA G + C content is 55.7 mol%. Comparative 16S rRNA gene sequence analysis revealed that strains T5(T) and Roseobacter gallaeciensis BS107(T) group with Leisingera methylohalidivorans as their closest described relative within the Roseobacter clade (97.9 and 97.6 % sequence similarity, respectively) and with Ruegeria algicola (96.6 and 96.5 % similarity, respectively) of the Alphaproteobacteria. Comparison of strains T5(T) and Roseobacter gallaeciensis BS107(T) with Roseobacter denitrificans and Roseobacter litoralis showed striking differences in 16S rRNA gene sequence similarities, chemical composition, pigmentation, presence of bacteriochlorophyll a and antibiotic production. On the basis of these results, it is proposed that Roseobacter gallaeciensis is reclassified as the type species of a new genus, Phaeobacter, as Phaeobacter gallaeciensis comb. nov. (type strain BS107(T) = CIP 105210(T) = ATCC 700781(T) = NBRC 16654(T) = DSM 17395(T)). Strain T5(T) (=LMG 22475(T) = DSM 16374(T)) is proposed as the type strain of a novel species of this genus, Phaeobacter inhibens sp. nov. At the same time, emended descriptions are provided of the genera Roseobacter, Ruegeria and Leisingera, as well as reclassifying Ruegeria algicola as the type species of a new genus, Marinovum, with the name Marinovum algicola comb. nov.

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Year:  2006        PMID: 16738106     DOI: 10.1099/ijs.0.63724-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  59 in total

1.  Genetic analysis of the upper phenylacetate catabolic pathway in the production of tropodithietic acid by Phaeobacter gallaeciensis.

Authors:  Martine Berger; Nelson L Brock; Heiko Liesegang; Marco Dogs; Ines Preuth; Meinhard Simon; Jeroen S Dickschat; Thorsten Brinkhoff
Journal:  Appl Environ Microbiol       Date:  2012-03-09       Impact factor: 4.792

2.  Bacteria of the Roseobacter clade show potential for secondary metabolite production.

Authors:  Torben Martens; Lone Gram; Hans-Peter Grossart; Daniel Kessler; Rolf Müller; Meinhard Simon; Silke C Wenzel; Thorsten Brinkhoff
Journal:  Microb Ecol       Date:  2007-03-10       Impact factor: 4.552

3.  Vadicella arenosi gen. nov., sp. nov., a novel member of the class Alphaproteobacteria isolated from sandy sediments from the Sea of Japan seashore.

Authors:  Lyudmila A Romanenko; Naoto Tanaka; Vasily I Svetashev; Valery V Mikhailov
Journal:  Curr Microbiol       Date:  2010-10-26       Impact factor: 2.188

4.  Carbohydrate catabolism in Phaeobacter inhibens DSM 17395, a member of the marine roseobacter clade.

Authors:  Katharina Wiegmann; Michael Hensler; Lars Wöhlbrand; Marcus Ulbrich; Dietmar Schomburg; Ralf Rabus
Journal:  Appl Environ Microbiol       Date:  2014-08       Impact factor: 4.792

5.  Seohaeicola nanhaiensis sp. nov., a moderately halophilic bacterium isolated from the benthic sediment of South China Sea.

Authors:  Bai-Sheng Xie; Xiang-Lin Lv; Man Cai; Yue-Qin Tang; Yan-Nan Wang; Heng-Lin Cui; Xue-Ying Liu; Yan Tan; Xiao-Lei Wu
Journal:  Curr Microbiol       Date:  2014-07-16       Impact factor: 2.188

6.  Nonphotosynthetic pigments as potential biosignatures.

Authors:  Edward W Schwieterman; Charles S Cockell; Victoria S Meadows
Journal:  Astrobiology       Date:  2015-05-05       Impact factor: 4.335

7.  Phaeobacter and Ruegeria species of the Roseobacter clade colonize separate niches in a Danish Turbot (Scophthalmus maximus)-rearing farm and antagonize Vibrio anguillarum under different growth conditions.

Authors:  Cisse Hedegaard Porsby; Kristian Fog Nielsen; Lone Gram
Journal:  Appl Environ Microbiol       Date:  2008-10-24       Impact factor: 4.792

8.  Roseovarius tibetensis sp. nov., a halophilic bacterium isolated from Lake LongmuCo on Tibetan Plateau.

Authors:  Hui-Bin Lu; Xiao-Feng Xue; Dorji Phurbu; Peng Xing; Qing-Long Wu
Journal:  J Microbiol       Date:  2018-10-24       Impact factor: 3.422

9.  Genetic tools for the investigation of Roseobacter clade bacteria.

Authors:  Tanja Piekarski; Ina Buchholz; Thomas Drepper; Max Schobert; Irene Wagner-Doebler; Petra Tielen; Dieter Jahn
Journal:  BMC Microbiol       Date:  2009-12-18       Impact factor: 3.605

10.  Metabolic fluxes in the central carbon metabolism of Dinoroseobacter shibae and Phaeobacter gallaeciensis, two members of the marine Roseobacter clade.

Authors:  Tobias Fürch; Matthias Preusse; Jürgen Tomasch; Hajo Zech; Irene Wagner-Döbler; Ralf Rabus; Christoph Wittmann
Journal:  BMC Microbiol       Date:  2009-09-29       Impact factor: 3.605

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