Literature DB >> 16736571

[Biodiversity of halophilic archaea isolated from two salt lakes in Xin-Jiang region of China].

Heng-Lin Cui1, Yong Yang, Tohty Dilbr, Pei-Jin Zhou, Shuang-Jiang Liu.   

Abstract

There are more than 1000 salt lakes situated in northern and western regions of China and 790 of these salt lakes are in Xinjiang Uigur Autonomous Region and Qinghai, Tibet, Inner Mongolia. To better understand halophilic archaeal diversity of salt lakes in Xinjiang, water and sediment samples were collected from two salt lakes, namely Aibi salt lake and Aiding salt lake, and the halophilic archaeal diversity of these samples was determined. Totally eighty-six halophilic archeal strains, of which 56 isolated from Aibi salt lake and 30 isolated from Aiding salt lake, were isolated respectively using CM agar medium. All the strains were subjected to 16S rRNA gene sequencing analysis. Similarity analysis based on 16S rRNA gene sequences of all these strains indicated that the isolates from Aibi salt lake belong to 11 different species of genera Haloarcula, Halobacterium, Halorubrum, Haloterrigena, Natrinema and Natronorubrum, and that the isolates from Aiding salt lake belong to 8 different species of genera Haloarcula, Halobiforma, Halorubrum, Haloterrigena, Natrinema. Among the 86 strains, members of Natronorubrum Natrinema, Halorubrum and Haloterrigena, are dominant groups in Aibi salt lake. However, the dominant group in Aibi salt lake are the members of Natrinema, Halorubrum and Haloterrigena. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strains ABH13, ABH 14, ABH 15, ABH 18, ABH 31 and ABH 33 may represent a novel species of Natronorubrum; ABH12, ABH32 and AD30 two novel species of Halorubrum; ABH17 and ABH25, ABH51, ABH52, ABH56 two novel species of Haloterrigena respectively; strain ABH19 a novel species of Haloarcula; strain ABHO7 a novel species of Halobacterium. The Shannon-Wiener's index of Aibi salt lake is 1.899, the same index of Aiding salt lake is 1.317, which indicated that the biodiversity of halophilic archaea from Aibi salt lake was slightly higher than that of Aiding salt lake. Different characteristics in pH of salt concentrations, average annual precipitation, annual evaporation and mankind's impact on two salt lakes might play important roles on halophilic archaeal diversity of two salt lakes.

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Year:  2006        PMID: 16736571

Source DB:  PubMed          Journal:  Wei Sheng Wu Xue Bao        ISSN: 0001-6209


  1 in total

1.  Draft Genome Sequence of the Extremely Halophilic Bacterium Halomonas salina Strain CIFRI1, Isolated from the East Coast of India.

Authors:  Bijay Kumar Behera; Priyanka Das; Jitendra Maharana; Prasenjit Paria; Shambhu Nath Mandal; Dharmendra Kumar Meena; Anil Prakash Sharma; Rijith Jayarajan; Vishal Dixit; Ankit Verma; Shamsudheen Karuthedath Vellarikkal; Vinod Scaria; Sridhar Sivasubbu; Atmakuri Ramakrishna Rao; Trilochan Mohapatra
Journal:  Genome Announc       Date:  2015-01-08
  1 in total

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