Literature DB >> 16735069

Evaluation of uncertainty in quantitative real-time PCR.

John L Love1, Paula Scholes, Brent Gilpin, Marion Savill, Susan Lin, Laly Samuel.   

Abstract

Quantitative real-time PCR is one of the newer methods for measurement of the amount of nucleic material in biological systems. However, reliable measurement requires an appropriate estimation of uncertainty and this paper has developed the uncertainty budget associated with this procedure using as an example, data from a quantitative real-time PCR method for the enumeration of Campylobacter jejuni. This uncertainty is relatively large and for instance, a measured result of 151 units of DNA would have a 95% confidence interval of +/-84 units of DNA with the main sources of uncertainty being the measurement of the threshold cycle (Ct) value, the predicted DNA content of the unknown sample from the calibration line and the molar absorbance value for DNA.

Entities:  

Mesh:

Substances:

Year:  2006        PMID: 16735069     DOI: 10.1016/j.mimet.2006.04.005

Source DB:  PubMed          Journal:  J Microbiol Methods        ISSN: 0167-7012            Impact factor:   2.363


  6 in total

1.  Error estimation in environmental DNA targets quantification due to PCR efficiencies differences between real samples and standards.

Authors:  Leonardo Martín Pérez; Mariana Fittipaldi; Bárbara Adrados; Jordi Morató; Francesc Codony
Journal:  Folia Microbiol (Praha)       Date:  2013-05-07       Impact factor: 2.099

2.  pH gradient and distribution of streptococci, lactobacilli, prevotellae, and fusobacteria in carious dentine.

Authors:  Nima Kianoush; Ky-Anh T Nguyen; Gina V Browne; Mary Simonian; Neil Hunter
Journal:  Clin Oral Investig       Date:  2013-06-16       Impact factor: 3.573

3.  SYBR Green based real-time RT-PCR assay for detection and genotype prediction of bovine noroviruses and assessment of clinical significance in Norway.

Authors:  Evert Jor; Mette Myrmel; Christine M Jonassen
Journal:  J Virol Methods       Date:  2010-04-08       Impact factor: 2.014

4.  Streamlined and quantitative detection of chimerism using digital PCR.

Authors:  Fabian P Suchy; Toshiya Nishimura; Shinsuke Seki; Adam C Wilkinson; Maimi Higuchi; Ian Hsu; Jinyu Zhang; Joydeep Bhadury; Hiromitsu Nakauchi
Journal:  Sci Rep       Date:  2022-06-17       Impact factor: 4.996

5.  Abundance and distribution of archaeal acetyl-CoA/propionyl-CoA carboxylase genes indicative for putatively chemoautotrophic Archaea in the tropical Atlantic's interior.

Authors:  Kristin Bergauer; Eva Sintes; Judith van Bleijswijk; Harry Witte; Gerhard J Herndl
Journal:  FEMS Microbiol Ecol       Date:  2013-02-13       Impact factor: 4.194

6.  Selection and evaluation of housekeeping genes as endogenous controls for quantification of mRNA transcripts in Theileria parva using quantitative real-time polymerase chain reaction (qPCR).

Authors:  Teboho N Tsotetsi; Nicola E Collins; Marinda C Oosthuizen; Kgomotso P Sibeko-Matjila
Journal:  PLoS One       Date:  2018-05-04       Impact factor: 3.240

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.