Literature DB >> 16734781

High-level expression of pseudogenes in Mycobacterium leprae.

Koichi Suzuki1, Noboru Nakata, Pham Dang Bang, Norihisa Ishii, Masahiko Makino.   

Abstract

Recent studies have revealed that some RNAs are transcribed from noncoding DNA regions, including pseudogenes, and are functional as riboregulators. We have attempted to assess the gene expression profile throughout the Mycobacterium leprae genome using an array technique. Twelve highly expressed gene regions were identified that show an alteration in expression levels upon infection. Six of these were pseudogenes. Although M. leprae has an exceptional number and proportion of pseudogenes among species, our results suggest that some of the M. leprae pseudogenes are not just 'decayed' genes, but may have a functional role.

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Year:  2006        PMID: 16734781     DOI: 10.1111/j.1574-6968.2006.00276.x

Source DB:  PubMed          Journal:  FEMS Microbiol Lett        ISSN: 0378-1097            Impact factor:   2.742


  11 in total

Review 1.  Mycobacterium leprae-host-cell interactions and genetic determinants in leprosy: an overview.

Authors:  Roberta Olmo Pinheiro; Jorgenilce de Souza Salles; Euzenir Nunes Sarno; Elizabeth Pereira Sampaio
Journal:  Future Microbiol       Date:  2011-02       Impact factor: 3.165

Review 2.  Mycobacterium leprae: genes, pseudogenes and genetic diversity.

Authors:  Pushpendra Singh; Stewart T Cole
Journal:  Future Microbiol       Date:  2011-01       Impact factor: 3.165

Review 3.  Pseudogenes: pseudo-functional or key regulators in health and disease?

Authors:  Ryan Charles Pink; Kate Wicks; Daniel Paul Caley; Emma Kathleen Punch; Laura Jacobs; David Raul Francisco Carter
Journal:  RNA       Date:  2011-03-11       Impact factor: 4.942

4.  Novel coordination of lipopolysaccharide modifications in Vibrio cholerae promotes CAMP resistance.

Authors:  Carmen M Herrera; Jeremy C Henderson; Alexander A Crofts; M Stephen Trent
Journal:  Mol Microbiol       Date:  2017-10-06       Impact factor: 3.501

5.  Detection of Mycobacterium leprae DNA from archaeological skeletal remains in Japan using whole genome amplification and polymerase chain reaction.

Authors:  Koichi Suzuki; Wataru Takigawa; Kazunari Tanigawa; Kazuaki Nakamura; Yuko Ishido; Akira Kawashima; Huhehasi Wu; Takeshi Akama; Mariko Sue; Aya Yoshihara; Shuichi Mori; Norihisa Ishii
Journal:  PLoS One       Date:  2010-08-26       Impact factor: 3.240

6.  Whole-genome tiling array analysis of Mycobacterium leprae RNA reveals high expression of pseudogenes and noncoding regions.

Authors:  Takeshi Akama; Koichi Suzuki; Kazunari Tanigawa; Akira Kawashima; Huhehasi Wu; Noboru Nakata; Yasunori Osana; Yasubumi Sakakibara; Norihisa Ishii
Journal:  J Bacteriol       Date:  2009-03-13       Impact factor: 3.490

7.  To Be or Not to Be a Pseudogene: A Molecular Epidemiological Approach to the mclx Genes and Its Impact in Tuberculosis.

Authors:  Catarina Lopes Santos; Hanna Nebenzahl-Guimaraes; Marta Vaz Mendes; Dick van Soolingen; Margarida Correia-Neves
Journal:  PLoS One       Date:  2015-06-02       Impact factor: 3.240

8.  Complete genome sequence and annotation of the laboratory reference strain Shigella flexneri serotype 5a M90T and genome-wide transcriptional start site determination.

Authors:  Ramón Cervantes-Rivera; Sophie Tronnet; Andrea Puhar
Journal:  BMC Genomics       Date:  2020-04-06       Impact factor: 3.969

9.  Implications of high level pseudogene transcription in Mycobacterium leprae.

Authors:  Diana L Williams; Richard A Slayden; Amol Amin; Alejandra N Martinez; Tana L Pittman; Alex Mira; Anirban Mitra; Valakunja Nagaraja; Norman E Morrison; Milton Moraes; Thomas P Gillis
Journal:  BMC Genomics       Date:  2009-08-25       Impact factor: 3.969

10.  Decoding the similarities and differences among mycobacterial species.

Authors:  Sony Malhotra; Sundeep Chaitanya Vedithi; Tom L Blundell
Journal:  PLoS Negl Trop Dis       Date:  2017-08-30
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