Literature DB >> 16733207

BCL6 alternative breakpoint region break and homozygous deletion of 17q24 in the nodular lymphocyte predominance type of Hodgkin's lymphoma-derived cell line DEV.

Ciğdem Atayar1, Klaas Kok, Joost Kluiver, Anneke Bosga, Eva van den Berg, Pieter van der Vlies, Tjasso Blokzijl, Geert Harms, Inge Davelaar, Birgit Sikkema-Raddatz, Jose Ignacio Martin-Subero, Reiner Siebert, Sibrand Poppema, Anke van den Berg.   

Abstract

DEV is the only cell line derived from nodular lymphocyte predominance type of Hodgkin's lymphoma (NLPHL); however, a comprehensive report about the genetic and immunophenotypic profile of this unique cell line is lacking. We analyzed DEV with respect to immunophenotype and genetic aberrations. The immunostaining revealed positivity for CD45, CD20, CD22, CD79a, IgA2, CD80, CD86, CD74, and BCL6. Cytogenetically, DEV has complex chromosome 3 translocations involving chromosomes 7, 14, and 22. A detailed analysis of the 3q27 breakpoint of the der(3)t(3;14)(p14;q32)t(3;22)(q27;q11.2) revealed a break in the BCL6 alternative breakpoint region. Using array comparative genomic hybridization, a 3-megabase homozygous deletion at 17q24.1-24.2 was identified. Fluorescence in situ hybridization indicated the presence of 2 chromosome 17 homologues, each of which carried a small interstitial deletion. Eight microsatellite markers flanking the homozygously deleted region all showed a homozygous pattern suggesting loss of one of the parental alleles. D17S1809 and D17S1816 could not be amplified using DEV DNA, in keeping with a location within the homozygously deleted segment. In conclusion, DEV has an immunophenotype that is consistent with the neoplastic cells of NLPHL cases, the lymphocytic and histiocytic cells. We demonstrated involvement of the BCL6 gene based on the presence of a breakpoint in the alternative breakpoint region and nuclear staining for BCL6 protein and identified a homozygously deleted region at 17q24.

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Year:  2006        PMID: 16733207     DOI: 10.1016/j.humpath.2006.01.018

Source DB:  PubMed          Journal:  Hum Pathol        ISSN: 0046-8177            Impact factor:   3.466


  8 in total

1.  High-resolution mapping identifies a commonly amplified 11q13.3 region containing multiple genes flanked by segmental duplications.

Authors:  Johan H Gibcus; Klaas Kok; Lorian Menkema; Mario A Hermsen; Mirjam Mastik; Philip M Kluin; Jacqueline E van der Wal; Ed Schuuring
Journal:  Hum Genet       Date:  2006-12-15       Impact factor: 4.132

2.  Duplication of the Williams-Beuren critical region: case report and further delineation of the phenotypic spectrum.

Authors:  C Orellana; J Bernabeu; S Monfort; M Roselló; S Oltra; I Ferrer; R Quiroga; I Martínez-Garay; F Martínez
Journal:  BMJ Case Rep       Date:  2009-07-05

3.  Duplication of the Williams-Beuren critical region: case report and further delineation of the phenotypic spectrum.

Authors:  C Orellana; Jordi Bernabeu; Sandra Monfort; Monica Rosello; Juan Silvestre Oltra; Irene Ferrer; Ramiro Quiroga; Isabel Martinez-Garay; Francisco Martinez
Journal:  BMJ Case Rep       Date:  2009-01-23

4.  Hodgkin lymphoma cell lines are characterized by a specific miRNA expression profile.

Authors:  Johan H Gibcus; Lu Ping Tan; Geert Harms; Rikst Nynke Schakel; Debora de Jong; Tjasso Blokzijl; Peter Möller; Sibrand Poppema; Bart-Jan Kroesen; Anke van den Berg
Journal:  Neoplasia       Date:  2009-02       Impact factor: 5.715

5.  Mutations in the genes coding for the NF-κB regulating factors IκBα and A20 are uncommon in nodular lymphocyte-predominant Hodgkin's lymphoma.

Authors:  Martin A Schumacher; Roland Schmitz; Verena Brune; Enrico Tiacci; Claudia Döring; Martin-Leo Hansmann; Reiner Siebert; Ralf Küppers
Journal:  Haematologica       Date:  2009-07-31       Impact factor: 9.941

6.  The putative RNA helicase HELZ promotes cell proliferation, translation initiation and ribosomal protein S6 phosphorylation.

Authors:  Philippe A Hasgall; David Hoogewijs; Marius B Faza; Vikram G Panse; Roland H Wenger; Gieri Camenisch
Journal:  PLoS One       Date:  2011-07-13       Impact factor: 3.240

7.  Cellular localization and processing of primary transcripts of exonic microRNAs.

Authors:  Izabella Slezak-Prochazka; Joost Kluiver; Debora de Jong; Gertrud Kortman; Nancy Halsema; Sibrand Poppema; Bart-Jan Kroesen; Anke van den Berg
Journal:  PLoS One       Date:  2013-09-20       Impact factor: 3.240

Review 8.  Genomic Landscape of Hodgkin Lymphoma.

Authors:  Magdalena M Brune; Darius Juskevicius; Jasmin Haslbauer; Stefan Dirnhofer; Alexandar Tzankov
Journal:  Cancers (Basel)       Date:  2021-02-08       Impact factor: 6.639

  8 in total

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