Literature DB >> 16723682

Detection of individual microbial pathogens by proximity ligation.

Sigrun M Gustafsdottir1, Ann Nordengrahn, Simon Fredriksson, Per Wallgren, Esteban Rivera, Edith Schallmeiner, Malik Merza, Ulf Landegren.   

Abstract

BACKGROUND: Nucleic acid amplification allows the detection of single infectious agents. Protein-based assays, although they provide information on ongoing infections, have substantially less detection sensitivity.
METHODS: We used proximity ligation reactions to detect proteins on bacteria and virus particles via nucleic acid amplification. Antibodies recognizing viral or bacterial surface proteins were equipped with DNA strands that could be joined by ligation when several antibodies were bound in proximity to surface proteins of individual infectious agents.
RESULTS: Detection sensitivities similar to those of nucleic acid-based detection reactions were achieved directly in infected samples for a parvovirus and an intracellular bacterium.
CONCLUSIONS: This method enables detection of ligated DNA strands with good sensitivity by real-time PCR and could be of value for early diagnosis of infectious disease and in biodefense.

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Year:  2006        PMID: 16723682     DOI: 10.1373/clinchem.2005.065847

Source DB:  PubMed          Journal:  Clin Chem        ISSN: 0009-9147            Impact factor:   8.327


  22 in total

1.  Real-time PCR detection of protein analytes with conformation-switching aptamers.

Authors:  Litao Yang; Andrew D Ellington
Journal:  Anal Biochem       Date:  2008-05-20       Impact factor: 3.365

2.  Sensitive plasma protein analysis by microparticle-based proximity ligation assays.

Authors:  Spyros Darmanis; Rachel Yuan Nong; Maria Hammond; Jijuan Gu; Anders Alderborn; Johan Vänelid; Agneta Siegbahn; Sigrun Gustafsdottir; Olle Ericsson; Ulf Landegren; Masood Kamali-Moghaddam
Journal:  Mol Cell Proteomics       Date:  2009-11-27       Impact factor: 5.911

3.  Multiplexed homogeneous proximity ligation assays for high-throughput protein biomarker research in serological material.

Authors:  Martin Lundberg; Stine Buch Thorsen; Erika Assarsson; Andrea Villablanca; Bonnie Tran; Nick Gee; Mick Knowles; Birgitte Sander Nielsen; Eduardo González Couto; Roberto Martin; Olle Nilsson; Christian Fermer; Jörg Schlingemann; Ib Jarle Christensen; Hans-Jorgen Nielsen; Björn Ekström; Claes Andersson; Mats Gustafsson; Nils Brunner; Jan Stenvang; Simon Fredriksson
Journal:  Mol Cell Proteomics       Date:  2011-01-17       Impact factor: 5.911

Review 4.  Proximity ligation assay: an ultrasensitive method for protein quantification and its applications in pathogen detection.

Authors:  Pengzhi Wang; Yi Yang; Tianqi Hong; Guoqiang Zhu
Journal:  Appl Microbiol Biotechnol       Date:  2021-01-11       Impact factor: 4.813

Review 5.  A review on emerging diagnostic assay for viral detection: the case of avian influenza virus.

Authors:  Taha Roodbar Shojaei; Meisam Tabatabaei; Sherif Shawky; Mohamad Amran Mohd Salleh; Dirk Bald
Journal:  Mol Biol Rep       Date:  2014-09-23       Impact factor: 2.316

6.  Deletion of a Predicted β-Sheet Domain within the Amino Terminus of Herpes Simplex Virus Glycoprotein K Conserved among Alphaherpesviruses Prevents Virus Entry into Neuronal Axons.

Authors:  Nithya Jambunathan; Anu-Susan Charles; Ramesh Subramanian; Ahmad A Saied; Misagh Naderi; Paul Rider; Michal Brylinski; Vladimir N Chouljenko; Konstantin G Kousoulas
Journal:  J Virol       Date:  2015-12-09       Impact factor: 5.103

7.  Multiplex protein detection with DNA readout via mass spectrometry.

Authors:  James Flanigon; Masood Kamali-Moghaddam; Ian Burbulis; Carla Annink; Martin Steffen; Paul Oeth; Roger Brent; Dirk van den Boom; Ulf Landegren; Charles Cantor
Journal:  N Biotechnol       Date:  2012-11-28       Impact factor: 5.079

8.  Use of proximity ligation to screen for inhibitors of interactions between vascular endothelial growth factor A and its receptors.

Authors:  Sigrun M Gustafsdottir; Stefan Wennström; Simon Fredriksson; Edith Schallmeiner; Andrew D Hamilton; Said M Sebti; Ulf Landegren
Journal:  Clin Chem       Date:  2008-05-22       Impact factor: 8.327

9.  Sensitive detection of Aβ protofibrils by proximity ligation--relevance for Alzheimer's disease.

Authors:  Masood Kamali-Moghaddam; Frida Ekholm Pettersson; Di Wu; Hillevi Englund; Spyros Darmanis; Anna Lord; Gholamreza Tavoosidana; Dag Sehlin; Sigrun Gustafsdottir; Lars N G Nilsson; Lars Lannfelt; Ulf Landegren
Journal:  BMC Neurosci       Date:  2010-10-05       Impact factor: 3.288

10.  PathogenMip assay: a multiplex pathogen detection assay.

Authors:  Michael S Akhras; Sreedevi Thiyagarajan; Andrea C Villablanca; Ronald W Davis; Pål Nyrén; Nader Pourmand
Journal:  PLoS One       Date:  2007-02-21       Impact factor: 3.240

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