Literature DB >> 16711757

logD7.4 modeling using Bayesian Regularized Neural Networks. Assessment and correction of the errors of prediction.

Pierre Bruneau1, Nathan R McElroy.   

Abstract

Bayesian Regularized Neural Networks (BRNNs) employing Automatic Relevance Determination (ARD) are used to construct a predictive model for the distribution coefficient logD7.4 from an in-house data set of 5000 compounds with experimental endpoints. A method for assessing the accuracy of prediction is established based upon a query compound's distance to the training set. logD7.4 predictions are also dynamically corrected with an associated library of compounds of continuously updated, experimentally measured logD7.4 values. A comparison of local models and associated libraries comprising separate ionization class subsets of compounds to compounds of a homogeneous ionization class reveals in this case that local models and libraries have no advantage over global models and libraries.

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Year:  2006        PMID: 16711757     DOI: 10.1021/ci0504014

Source DB:  PubMed          Journal:  J Chem Inf Model        ISSN: 1549-9596            Impact factor:   4.956


  7 in total

1.  Estimating the domain of applicability for machine learning QSAR models: a study on aqueous solubility of drug discovery molecules.

Authors:  Timon Sebastian Schroeter; Anton Schwaighofer; Sebastian Mika; Antonius Ter Laak; Detlev Suelzle; Ursula Ganzer; Nikolaus Heinrich; Klaus-Robert Müller
Journal:  J Comput Aided Mol Des       Date:  2007-12-01       Impact factor: 3.686

2.  Estimating the domain of applicability for machine learning QSAR models: a study on aqueous solubility of drug discovery molecules.

Authors:  Timon Sebastian Schroeter; Anton Schwaighofer; Sebastian Mika; Antonius Ter Laak; Detlev Suelzle; Ursula Ganzer; Nikolaus Heinrich; Klaus-Robert Müller
Journal:  J Comput Aided Mol Des       Date:  2007-07-14       Impact factor: 3.686

3.  Deep architectures and deep learning in chemoinformatics: the prediction of aqueous solubility for drug-like molecules.

Authors:  Alessandro Lusci; Gianluca Pollastri; Pierre Baldi
Journal:  J Chem Inf Model       Date:  2013-07-02       Impact factor: 4.956

4.  DPP1 Inhibitors: Exploring the Role of Water in the S2 Pocket of DPP1 with Substituted Pyrrolidines.

Authors:  Helena Käck; Kevin Doyle; Samantha J Hughes; Michael S Bodnarchuk; Hans Lönn; Amanda Van De Poël; Nicholas Palmer
Journal:  ACS Med Chem Lett       Date:  2019-07-15       Impact factor: 4.345

5.  Guidelines for the welfare and use of animals in cancer research.

Authors:  P Workman; E O Aboagye; F Balkwill; A Balmain; G Bruder; D J Chaplin; J A Double; J Everitt; D A H Farningham; M J Glennie; L R Kelland; V Robinson; I J Stratford; G M Tozer; S Watson; S R Wedge; S A Eccles
Journal:  Br J Cancer       Date:  2010-05-25       Impact factor: 7.640

6.  QSAR with experimental and predictive distributions: an information theoretic approach for assessing model quality.

Authors:  David J Wood; Lars Carlsson; Martin Eklund; Ulf Norinder; Jonna Stålring
Journal:  J Comput Aided Mol Des       Date:  2013-03-16       Impact factor: 3.686

7.  A universal similarity based approach for predictive uncertainty quantification in materials science.

Authors:  Vadim Korolev; Iurii Nevolin; Pavel Protsenko
Journal:  Sci Rep       Date:  2022-09-02       Impact factor: 4.996

  7 in total

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