Literature DB >> 16704852

Human Bocavirus infection, Canada.

Nathalie Bastien1, Ken Brandt, Kerry Dust, Diane Ward, Yan Li.   

Abstract

Human Bocavirus was detected in 18 (1.5%) of 1,209 respiratory specimens collected in 2003 and 2004 in Canada. The main symptoms of affected patients were cough (78%), fever (67%), and sore throat (44%). Nine patients were hospitalized; of these, 8 (89%) were <5 years of age.

Entities:  

Mesh:

Substances:

Year:  2006        PMID: 16704852      PMCID: PMC3374420          DOI: 10.3201/eid1205.051424

Source DB:  PubMed          Journal:  Emerg Infect Dis        ISSN: 1080-6040            Impact factor:   6.883


A new parvovirus, human Bocavirus (HBoV), was recently identified in Sweden (). The virus was identified in clinical specimens from infants and children with respiratory tract illness. Phylogenetic analyses of the complete genome of HBoV showed that that the virus is most closely related to canine minute virus and bovine parvovirus, which are members of the genus Bocavirus, family Parvoviridae (). To date, the only parvovirus known to be pathogenic in humans is B19, which is responsible for Fifth disease in children (). The role of HBoV in respiratory tract illnesses is unknown. We retrospectively investigated HBoV in Canadian patients with acute respiratory infection (ARI) in 2003 and 2004 to assess the impact of HBoV infections on respiratory tract illnesses and identify the signs and symptoms of this illness.

The Study

A total of 1,209 specimens from patients with ARI from January 2003 to December 2004 were tested for HBoV. The specimens originated from the Saskatchewan provincial public health laboratories. Specimen types analyzed included throat swabs, nasopharyngeal swabs, nasopharyngeal aspirates, and auger suctions. All specimens were negative for influenza viruses A and B; parainfluenza viruses 1, 2, and 3; adenovirus; and respiratory syncytial virus (RSV) by direct or indirect fluorescence assays or virus isolation and for human metapneumovirus (HMPV) by reverse transcription–polymerase chain reaction. Specimens were collected from all age groups: 290 (24%) from those <5 years of age, 59 (5%) from those 6–10 years of age, 90 (7.4%) from those 11–15 years of age, 86 (7.1%) from those 16–20 years of age, 358 (29.6%) from those 21–50 years of age, and 324 (27%) from those >50 years of age, The age of the patients was unknown for 2 (0.2%) specimens. HBoV was detected by polymerase chain reaction (PCR) using primers specific for 2 different regions of the genome. The screening primers 188F (2281-5´-GACCTCTGTAAGTACTATTAC-3´-2301) and 542R (2634-5´-CTCTGTGTTGACTGAATACAG-3´-2614), reported by Allander et al. (), were based on the sequence of the putative noncapsid protein 1 (NP-1) gene. The second set of primers, VP1/VP2F (4492-5´-GCAAACCCATCACTCTCAATGC-3´-4513) and VP1/VP2R (4895-5´-GCTCTCTCCTCCCAGTGACAT-3´-4875), was used for confirmation and was based on the published HBoV putative VP1/VP2 gene sequences (DQ000495) (). Viral DNA was extracted from 285 μL of original samples with a BioRobot MDx and the QiAamp Virus BioRobot MDX kit (Qiagen, Valencia, CA, USA). We used 5 μL of DNA in a volume of 50 μL containing 20 pmol of each primer. The thermocycler conditions were 95°C for 15 min for activation of HotStartTaq DNA polymerase (Qiagen); 35 cycles of 94°C for 1 min, 54°C for 1 min, and 72°C for 2 min; and extension at 72°C for 10 min. Nucleotide sequences of NP-1 gene amplicons were determined with an ABI 377 Sequencer and a fluorescent dye terminator kit (Applied Biosystems, Foster City, CA, USA). DNA sequences were assembled and analyzed with SEQMAN, EDITSEQ, and MEGALIGN programs in Lasergene (DNASTAR, Madison, WI, USA). To avoid cross-contamination, specimen processing, DNA extraction, amplification, and analyses were conducted in different rooms. For DNA extraction and PCR procedures, we included 12 negative controls per 96-well plate. A total of 18 (1.5%) of the 1,209 specimens tested were positive for HBoV by PCR. HBoV activity was found throughout the year with no apparent seasonal prevalence (Table 1). The sex distribution of patients was 61% (11) male and 39% (7) female (Table 2). Patients with HBoV ranged in age from 10 months to 60 years (median 11.5 years), and no significant difference in infection rates was observed between age groups.
Table 1

Distribution of human Bocavirus–positive specimens by month, Canada

DateNo. positive/no. tested
2003
Jan1/48
Feb2/51
Mar0/44
Apr1/49
May0/48
Jun4/54
Jul1/53
Aug0/46
Sep0/49
Oct0/51
Nov1/50
Dec1/50
2004
Jan0/50
Feb1/51
Mar0/48
Apr0/50
May0/50
Jun0/50
Jul1/50
Aug0/66
Sep1/52
Oct0/49
Nov3/50
Dec1/50
Table 2

Data from medical files of patients infected with human Bocavirus, Canada*

Specimen no.Date collectedSexPatient statusAgeSymptoms
883Jan 17, 2003MO23 yFever, cough
947Feb 5, 2003MH9 moFever, cough, nausea, rhinitis, pneumonia
963Feb 28, 2003FO11 yFever, cough, sore throat, rhinitis
1029Apr 10, 2003FO16 ySore throat, headache
1122Jul 8, 2003FH1 yFever, cough
1166Jun 10, 2003MO17 ySore throat, rhinitis
1178Jun 16, 2003MH28 yFever
1179Jun 16, 2003FH3 yFever, cough, rhinitis
1181Jun 18, 2003MH1 yFever, cough, rhinitis
1368Nov 1, 2003FO60 yCough, flulike symptoms, myalgia, headache, nausea
1431Dec 16, 2003FO41 yCough, sore throat, flulike symptoms, bronchiolitis
1545Feb 24, 2004MH10 moFever, cough, pneumonia
1776Jul 12, 2004MH2 yFever
1871Sep 3, 2004MH11 moCough, rhinitis, bronchiolitis, pneumonia
1979Nov 8, 2004FO12 yFever, cough, sore throat, flulike symptoms, headache
2013Nov 28, 2004MH9 moCough
2016Nov 25, 2004FO14 yFever, cough, sore throat, flulike symptoms
2021Dec 1, 2004MO37 yFever, cough, sore throat, flulike symptoms, headache

*O, outpatient; H, hospitalized.

*O, outpatient; H, hospitalized. The main clinical symptoms were cough (78%), fever (67%), and sore throat (44%) (Table 2). Other clinical symptoms included flulike symptoms (28%), headache (22%), nausea (17%), and myalgia (11%). Five patients had rhinitis, 1 had pneumonia, and 1 had bronchiolitis. One patient had rhinitis, bronchiolitis, and pneumonia, and 1 patient had rhinitis and pneumonia. Nine (50%) HBoV patients were hospitalized; 8 (89%) were <5 years of age, and 1 was between 21 and 50 years of age. The incidence of lower respiratory tract infection was lower in outpatients: 1 with bronchiolitis and no pneumonia (Table 2). Although the infection rates were similar in all age groups, a significant increase in hospitalization rates was seen in those <5 years of age compared with those >6 years of age (8/8 vs. 1/10, p = 0.001) (Table 2). All patients with pneumonia (3/3) and half of those with bronchiolitis (1/2) were also in this age group. Nucleotide sequences were determined for nucleotides 2342–2581 that encode the NP-1 gene of HBoV (GenBank accession nos. DQ267760–DQ267775). No differences in nucleic acid sequences were found between different Canadian isolates. These isolates were also identical to 2 Swedish isolates (ST1 and ST2, GenBank accession nos. DQ000495–DQ000496) ().

Conclusions

Although a causal relationship still needs to be demonstrated by including a control group of healthy persons, detection of HBoV in respiratory tract specimens from patients with undiagnosed ARI suggests that this virus may be associated with respiratory illness. This finding supports those of Allander et al. with regard to the association of HBoV with respiratory disease (). It also demonstrates that HBoV was present in Canada in 2003 and 2004, which suggests that it may be circulating worldwide. Since this study used only samples from ARI patients who tested negative for influenza viruses A and B, parainfluenza viruses 1–3, adenovirus, RSV, and HMPV, dual infection cannot be excluded. In addition, whether HBoV is present asymptomatically in humans cannot be excluded because samples from healthy persons were not tested. Allander et al. reported HBoV only in infants and children, which was probably the result of testing fewer specimens from adults patients (). Most respiratory viruses show a seasonal distribution with peak activity in winter. Human parvovirus B19, the only parvovirus that is pathogenic in humans, is also seasonal, with peak occurrences in spring and summer (). In contrast, no seasonal prevalence was observed for HBoV infection; the virus was found throughout the year. The lack of seasonality observed for HBoV may have been caused by the low prevalence in this study. Thus, additional year-round studies are needed to better understand the epidemiology of HBoV. Most (89%) hospitalizations were in persons <5 years of age, which suggests that HBoV may cause more severe respiratory illness in infants and children, similar to disease caused by RSV (,), HMPV (,), human coronavirus NL63 (–), and human coronavirus 229E (). More comprehensive studies with data on prevalence, risk factors, and use of health services are needed to determine the role of HBoV in ARI and its effect on the healthcare system.
  13 in total

1.  Impact of respiratory virus infections on persons with chronic underlying conditions.

Authors:  W P Glezen; S B Greenberg; R L Atmar; P A Piedra; R B Couch
Journal:  JAMA       Date:  2000-01-26       Impact factor: 56.272

2.  Cloning of a human parvovirus by molecular screening of respiratory tract samples.

Authors:  Tobias Allander; Martti T Tammi; Margareta Eriksson; Annelie Bjerkner; Annika Tiveljung-Lindell; Björn Andersson
Journal:  Proc Natl Acad Sci U S A       Date:  2005-08-23       Impact factor: 11.205

3.  Coronavirus infection in acute lower respiratory tract disease of infants.

Authors:  K McIntosh; R K Chao; H E Krause; R Wasil; H E Mocega; M A Mufson
Journal:  J Infect Dis       Date:  1974-11       Impact factor: 5.226

Review 4.  Human parvovirus B19.

Authors:  Erik D Heegaard; Kevin E Brown
Journal:  Clin Microbiol Rev       Date:  2002-07       Impact factor: 26.132

5.  Human metapneumovirus infection in the Canadian population.

Authors:  Nathalie Bastien; Diane Ward; Paul Van Caeseele; Ken Brandt; Spencer H S Lee; Gail McNabb; Brian Klisko; Edward Chan; Yan Li
Journal:  J Clin Microbiol       Date:  2003-10       Impact factor: 5.948

6.  Human coronavirus NL63 infection in Canada.

Authors:  Nathalie Bastien; Kelly Anderson; Laura Hart; Paul Van Caeseele; Ken Brandt; Doug Milley; Todd Hatchette; Elise C Weiss; Yan Li
Journal:  J Infect Dis       Date:  2005-01-04       Impact factor: 5.226

7.  Spectrum of clinical illness in hospitalized patients with "common cold" virus infections.

Authors:  H M El-Sahly; R L Atmar; W P Glezen; S B Greenberg
Journal:  Clin Infect Dis       Date:  2000-07-17       Impact factor: 9.079

8.  Detection of human coronavirus NL63 in young children with bronchiolitis.

Authors:  Takashi Ebihara; Rika Endo; Xiaoming Ma; Nobuhisa Ishiguro; Hideaki Kikuta
Journal:  J Med Virol       Date:  2005-03       Impact factor: 2.327

9.  Coronavirus 229E-related pneumonia in immunocompromised patients.

Authors:  Frédéric Pene; Annabelle Merlat; Astrid Vabret; Flore Rozenberg; Agnès Buzyn; François Dreyfus; Alain Cariou; François Freymuth; Pierre Lebon
Journal:  Clin Infect Dis       Date:  2003-09-08       Impact factor: 9.079

10.  Identification of a new human coronavirus.

Authors:  Lia van der Hoek; Krzysztof Pyrc; Maarten F Jebbink; Wilma Vermeulen-Oost; Ron J M Berkhout; Katja C Wolthers; Pauline M E Wertheim-van Dillen; Jos Kaandorp; Joke Spaargaren; Ben Berkhout
Journal:  Nat Med       Date:  2004-03-21       Impact factor: 53.440

View more
  116 in total

1.  Characterization of the gene expression profile of human bocavirus.

Authors:  Aaron Yun Chen; Fang Cheng; Sai Lou; Yong Luo; Zhengwen Liu; Eric Delwart; David Pintel; Jianming Qiu
Journal:  Virology       Date:  2010-05-10       Impact factor: 3.616

2.  A chronicle of SARS-CoV-2: Seasonality, environmental fate, transport, inactivation, and antiviral drug resistance.

Authors:  Manish Kumar; Payal Mazumder; Sanjeeb Mohapatra; Alok Kumar Thakur; Kiran Dhangar; Kaling Taki; Santanu Mukherjee; Arbind Kumar Patel; Prosun Bhattacharya; Pranab Mohapatra; Jörg Rinklebe; Masaaki Kitajima; Faisal I Hai; Anwar Khursheed; Hiroaki Furumai; Christian Sonne; Keisuke Kuroda
Journal:  J Hazard Mater       Date:  2020-10-06       Impact factor: 10.588

3.  Detection of human bocavirus 3 in China.

Authors:  Y Wang; R Gonzalez; H Zhou; J Li; Y Li; G Paranhos-Baccalà; G Vernet; L Guo; J Wang
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2011-02-01       Impact factor: 3.267

4.  The transcription profile of the bocavirus bovine parvovirus is unlike those of previously characterized parvoviruses.

Authors:  Jianming Qiu; Fang Cheng; F Brent Johnson; David Pintel
Journal:  J Virol       Date:  2007-08-22       Impact factor: 5.103

5. 

Authors:  Vincent Foulongne; Michel Segondy
Journal:  Rev Francoph Lab       Date:  2007-03-30

6.  Real-time PCR for diagnosis of human bocavirus infections and phylogenetic analysis.

Authors:  Florian Neske; Kerstin Blessing; Franz Tollmann; Jörg Schubert; Axel Rethwilm; Hans Wolfgang Kreth; Benedikt Weissbrich
Journal:  J Clin Microbiol       Date:  2007-05-02       Impact factor: 5.948

7.  Antibodies against structural and nonstructural proteins of human bocavirus in human sera.

Authors:  Reza Shirkoohi; Rika Endo; Nobuhisa Ishiguro; Shinobu Teramoto; Hideaki Kikuta; Tadashi Ariga
Journal:  Clin Vaccine Immunol       Date:  2009-12-02

8.  Impact of human bocavirus on children and their families.

Authors:  Susanna Esposito; Samantha Bosis; Hubert G M Niesters; Elena Tremolati; Caterina Sabatini; Alessandro Porta; Emilio Fossali; Albert D M E Osterhaus; Nicola Principi
Journal:  J Clin Microbiol       Date:  2008-02-20       Impact factor: 5.948

9.  Human bocavirus in febrile children, The Netherlands.

Authors:  Miriam Monteny; Hubert G M Niesters; Henriëtte A Moll; Marjolein Y Berger
Journal:  Emerg Infect Dis       Date:  2007-01       Impact factor: 6.883

10.  Human bocavirus, a respiratory and enteric virus.

Authors:  Diego Vicente; Gustavo Cilla; Milagrosa Montes; Eduardo G Pérez-Yarza; Emilio Pérez-Trallero
Journal:  Emerg Infect Dis       Date:  2007-04       Impact factor: 6.883

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.