Literature DB >> 16698204

QSPR models for the prediction of apparent volume of distribution.

Taravat Ghafourian1, Mohammad Barzegar-Jalali, Siavoush Dastmalchi, Tina Khavari-Khorasani, Nasim Hakimiha, Ali Nokhodchi.   

Abstract

An estimate of volume of distribution (V(d)) is of paramount importance both in drug choice as well as maintenance and loading dose calculations in therapeutics. It can also be used in the prediction of drug biological half life. This study employs quantitative structure-pharmacokinetic relationship (QSPR) techniques for the prediction of volume of distribution. Values of V(d) for 129 drugs were collated from the literature. Structural descriptors consisted of partitioning, quantum mechanical, molecular mechanical, and connectivity parameters calculated by specialized software and pK(a) values obtained from ACD labs/log D database. Genetic algorithm and stepwise regression analyses were used for variable selection and model development. Models were validated using a leave-many-out procedure. QSPR analyses resulted in a number of significant models for acidic and basic drugs separately, and for all the drugs. Validation studies showed that mean fold error of predictions for the selected models were between 1.79 and 2.17. Although separate QSPR models for acids and bases resulted in lower prediction errors than models for all the drugs, the external validation study showed a limited applicability for the equation obtained for acids. Therefore, the universal model that requires only calculated structural descriptors was recommended. The QSPR model is able to predict the volume of distribution of drugs belonging to different chemical classes with a prediction error similar to that of the other more complicated prediction methods including the commonly practiced interspecies scaling. The structural descriptors in the model can be interpreted based on the known mechanisms of distribution and the molecular structures of the drugs.

Mesh:

Substances:

Year:  2006        PMID: 16698204     DOI: 10.1016/j.ijpharm.2006.03.043

Source DB:  PubMed          Journal:  Int J Pharm        ISSN: 0378-5173            Impact factor:   5.875


  8 in total

Review 1.  Modeling kinetics of subcellular disposition of chemicals.

Authors:  Stefan Balaz
Journal:  Chem Rev       Date:  2009-05       Impact factor: 60.622

2.  Estimation of biliary excretion of foreign compounds using properties of molecular structure.

Authors:  Mohsen Sharifi; Taravat Ghafourian
Journal:  AAPS J       Date:  2013-11-08       Impact factor: 4.009

3.  QSAR models for the prediction of plasma protein binding.

Authors:  Taravat Ghafourian; Zeshan Amin
Journal:  Bioimpacts       Date:  2013-02-21

4.  Prediction of vitreal half-life based on drug physicochemical properties: quantitative structure-pharmacokinetic relationships (QSPKR).

Authors:  Chandrasekar Durairaj; Jaymin C Shah; Shruti Senapati; Uday B Kompella
Journal:  Pharm Res       Date:  2008-10-08       Impact factor: 4.200

5.  Galantamine-Curcumin Hybrids as Dual-Site Binding Acetylcholinesterase Inhibitors.

Authors:  Georgi Stavrakov; Irena Philipova; Atanas Lukarski; Mariyana Atanasova; Dimitrina Zheleva; Zvetanka D Zhivkova; Stefan Ivanov; Teodora Atanasova; Spiro Konstantinov; Irini Doytchinova
Journal:  Molecules       Date:  2020-07-23       Impact factor: 4.411

6.  Insights into the molecular properties underlying antibacterial activity of prenylated (iso)flavonoids against MRSA.

Authors:  Sylvia Kalli; Carla Araya-Cloutier; Jos Hageman; Jean-Paul Vincken
Journal:  Sci Rep       Date:  2021-07-09       Impact factor: 4.379

7.  Predicting volume of distribution with decision tree-based regression methods using predicted tissue:plasma partition coefficients.

Authors:  Alex A Freitas; Kriti Limbu; Taravat Ghafourian
Journal:  J Cheminform       Date:  2015-02-26       Impact factor: 5.514

8.  Molecular docking studies and ADME-Tox prediction of phytocompounds from Merremia peltata as a potential anti-alopecia treatment.

Authors:  Syawal Abdurrahman; Ruslin Ruslin; Aliya Nur Hasanah; Resmi Mustarichie
Journal:  J Adv Pharm Technol Res       Date:  2021-04-27
  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.