Literature DB >> 16691486

Nucleotide binding domain interactions during the mechanochemical reaction cycle of ATP-binding cassette transporters.

Jonathan E Moody1, Philip J Thomas.   

Abstract

ATP-binding cassette (ABC) transporters serve as importers and exporters for a wide variety of solutes in both prokaryotes and eukaryotes, and are implicated in microbial drug resistance and a number of significant human genetic disorders. Initial crystal structures of the soluble nucleotide binding domains (NBDs) of ABC transporters, while a significant step towards understanding the coupling of ATP binding and hydrolysis to transport, presented researchers with important questions surrounding the role of the signature sequence residues, the composition of the nucleotide binding sites, and the mode of NBD dimerization during the transport reaction cycle. Recent studies have begun to address these concerns. This mini-review summarizes the biochemical and structural characterizations of two archaebacterial NBDs from Methanocaldococcus jannaschii, MJ0796 and MJ1267, and offers current perspectives on the functional mechanism of ABC transporters.

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Year:  2005        PMID: 16691486     DOI: 10.1007/s10863-005-9494-8

Source DB:  PubMed          Journal:  J Bioenerg Biomembr        ISSN: 0145-479X            Impact factor:   2.945


  31 in total

Review 1.  Subunit interactions in ABC transporters: towards a functional architecture.

Authors:  P M Jones; A M George
Journal:  FEMS Microbiol Lett       Date:  1999-10-15       Impact factor: 2.742

Review 2.  The human ATP-binding cassette (ABC) transporter superfamily.

Authors:  M Dean; A Rzhetsky; R Allikmets
Journal:  Genome Res       Date:  2001-07       Impact factor: 9.043

3.  The crystal structure of the MJ0796 ATP-binding cassette. Implications for the structural consequences of ATP hydrolysis in the active site of an ABC transporter.

Authors:  Y R Yuan; S Blecker; O Martsinkevich; L Millen; P J Thomas; J F Hunt
Journal:  J Biol Chem       Date:  2001-06-11       Impact factor: 5.157

4.  The E. coli BtuCD structure: a framework for ABC transporter architecture and mechanism.

Authors:  Kaspar P Locher; Allen T Lee; Douglas C Rees
Journal:  Science       Date:  2002-05-10       Impact factor: 47.728

Review 5.  Inventory and function of yeast ABC proteins: about sex, stress, pleiotropic drug and heavy metal resistance.

Authors:  B E Bauer; H Wolfger; K Kuchler
Journal:  Biochim Biophys Acta       Date:  1999-12-06

6.  Peptides induce ATP hydrolysis at both subunits of the transporter associated with antigen processing.

Authors:  Min Chen; Rupert Abele; Robert Tampé
Journal:  J Biol Chem       Date:  2003-05-30       Impact factor: 5.157

7.  Crystal structure of the ATP-binding subunit of an ABC transporter.

Authors:  L W Hung; I X Wang; K Nikaido; P Q Liu; G F Ames; S H Kim
Journal:  Nature       Date:  1998-12-17       Impact factor: 49.962

8.  Vanadate-catalyzed photocleavage of the signature motif of an ATP-binding cassette (ABC) transporter.

Authors:  Erin E Fetsch; Amy L Davidson
Journal:  Proc Natl Acad Sci U S A       Date:  2002-07-01       Impact factor: 11.205

9.  ATP binding to the motor domain from an ABC transporter drives formation of a nucleotide sandwich dimer.

Authors:  Paul C Smith; Nathan Karpowich; Linda Millen; Jonathan E Moody; Jane Rosen; Philip J Thomas; John F Hunt
Journal:  Mol Cell       Date:  2002-07       Impact factor: 17.970

10.  Distantly related sequences in the alpha- and beta-subunits of ATP synthase, myosin, kinases and other ATP-requiring enzymes and a common nucleotide binding fold.

Authors:  J E Walker; M Saraste; M J Runswick; N J Gay
Journal:  EMBO J       Date:  1982       Impact factor: 11.598

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  16 in total

Review 1.  The role of ATP-binding cassette transporters in bacterial pathogenicity.

Authors:  Victoria G Lewis; Miranda P Ween; Christopher A McDevitt
Journal:  Protoplasma       Date:  2012-01-13       Impact factor: 3.356

2.  The H-loop in the second nucleotide-binding domain of the cystic fibrosis transmembrane conductance regulator is required for efficient chloride channel closing.

Authors:  Monika Kloch; Michał Milewski; Ewa Nurowska; Beata Dworakowska; Garry R Cutting; Krzysztof Dołowy
Journal:  Cell Physiol Biochem       Date:  2010-01-12

3.  Dynamics of alpha-helical subdomain rotation in the intact maltose ATP-binding cassette transporter.

Authors:  Cédric Orelle; Frances Joan D Alvarez; Michael L Oldham; Arnaud Orelle; Theodore E Wiley; Jue Chen; Amy L Davidson
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-08       Impact factor: 11.205

4.  The extreme C terminus of the ABC protein DrrA contains unique motifs involved in function and assembly of the DrrAB complex.

Authors:  Han Zhang; Prajakta Pradhan; Parjit Kaur
Journal:  J Biol Chem       Date:  2010-09-27       Impact factor: 5.157

5.  Biochemical dissection of the ATPase TraB, the VirB4 homologue of the Escherichia coli pKM101 conjugation machinery.

Authors:  Eric Durand; Clasien Oomen; Gabriel Waksman
Journal:  J Bacteriol       Date:  2010-02-19       Impact factor: 3.490

6.  Conformational and functional characterization of trapped complexes of the P-glycoprotein multidrug transporter.

Authors:  Paula L Russell; Frances J Sharom
Journal:  Biochem J       Date:  2006-10-15       Impact factor: 3.857

7.  Sequences in the nonconsensus nucleotide-binding domain of ABCG5/ABCG8 required for sterol transport.

Authors:  Jin Wang; Nick Grishin; Lisa Kinch; Jonathan C Cohen; Helen H Hobbs; Xiao-Song Xie
Journal:  J Biol Chem       Date:  2011-01-05       Impact factor: 5.157

8.  Conserved Asp327 of walker B motif in the N-terminal nucleotide binding domain (NBD-1) of Cdr1p of Candida albicans has acquired a new role in ATP hydrolysis.

Authors:  Versha Rai; Manisha Gaur; Sudhanshu Shukla; Suneet Shukla; Suresh V Ambudkar; Sneha Sudha Komath; Rajendra Prasad
Journal:  Biochemistry       Date:  2006-12-12       Impact factor: 3.162

Review 9.  CFTR structure and function: is there a role in the kidney?

Authors:  J Souza-Menezes; M M Morales
Journal:  Biophys Rev       Date:  2009-01-17

10.  RloC: a wobble nucleotide-excising and zinc-responsive bacterial tRNase.

Authors:  Elena Davidov; Gabriel Kaufmann
Journal:  Mol Microbiol       Date:  2008-08-04       Impact factor: 3.501

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