Literature DB >> 16690345

History, protohistory and prehistory of the Arabidopsis thaliana chromosome complement.

Yves Henry1, Mariette Bedhomme, Guillaume Blanc.   

Abstract

We propose an evolutionary scenario that could have shaped the modern Arabidopsis thaliana genome, which began with the reduction in chromosome number from n=8 to n=5 in the past 4 million to 5 million years as a result of chromosome fusion. The scenario also includes three ancient polyploidizations: the most recent occurred in an early Brassicaceae with n=4 chromosomes 24 million to 40 million years ago. The two other polyploidizations occurred after the emergence of the Eudicots and the Angiosperms, respectively. Angiosperm evolution includes recurrent cycles of genome duplication and gene and chromosome reorganizations.

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Year:  2006        PMID: 16690345     DOI: 10.1016/j.tplants.2006.04.002

Source DB:  PubMed          Journal:  Trends Plant Sci        ISSN: 1360-1385            Impact factor:   18.313


  19 in total

1.  Dated molecular phylogenies indicate a Miocene origin for Arabidopsis thaliana.

Authors:  Mark A Beilstein; Nathalie S Nagalingum; Mark D Clements; Steven R Manchester; Sarah Mathews
Journal:  Proc Natl Acad Sci U S A       Date:  2010-10-04       Impact factor: 11.205

2.  Compact genomes and complex evolution in the genus Brachypodium.

Authors:  Elzbieta Wolny; Karolina Lesniewska; Robert Hasterok; Tim Langdon
Journal:  Chromosoma       Date:  2010-12-30       Impact factor: 4.316

3.  The first genetic map of the American cranberry: exploration of synteny conservation and quantitative trait loci.

Authors:  Laura Georgi; Jennifer Johnson-Cicalese; Josh Honig; Sushma Parankush Das; Veeran D Rajah; Debashish Bhattacharya; Nahla Bassil; Lisa J Rowland; James Polashock; Nicholi Vorsa
Journal:  Theor Appl Genet       Date:  2012-12-08       Impact factor: 5.699

4.  The paralogous genes RADICAL-INDUCED CELL DEATH1 and SIMILAR TO RCD ONE1 have partially redundant functions during Arabidopsis development.

Authors:  Sachin Teotia; Rebecca S Lamb
Journal:  Plant Physiol       Date:  2009-07-22       Impact factor: 8.340

5.  A Time-Calibrated Road Map of Brassicaceae Species Radiation and Evolutionary History.

Authors:  Nora Hohmann; Eva M Wolf; Martin A Lysak; Marcus A Koch
Journal:  Plant Cell       Date:  2015-09-26       Impact factor: 11.277

6.  Comparative sequence analysis for Brassica oleracea with similar sequences in B. rapa and Arabidopsis thaliana.

Authors:  Dan Qiu; Muqiang Gao; Genyi Li; Carlos Quiros
Journal:  Plant Cell Rep       Date:  2008-12-28       Impact factor: 4.570

7.  Genomic origin and organization of the allopolyploid Primula egaliksensis investigated by in situ hybridization.

Authors:  Alessia Guggisberg; Célia Baroux; Ueli Grossniklaus; Elena Conti
Journal:  Ann Bot       Date:  2008-02-27       Impact factor: 4.357

8.  Genome sequence comparison of Col and Ler lines reveals the dynamic nature of Arabidopsis chromosomes.

Authors:  Piotr A Ziolkowski; Grzegorz Koczyk; Lukasz Galganski; Jan Sadowski
Journal:  Nucleic Acids Res       Date:  2009-03-21       Impact factor: 16.971

9.  Genome-wide comparative analysis of the Brassica rapa gene space reveals genome shrinkage and differential loss of duplicated genes after whole genome triplication.

Authors:  Jeong-Hwan Mun; Soo-Jin Kwon; Tae-Jin Yang; Young-Joo Seol; Mina Jin; Jin-A Kim; Myung-Ho Lim; Jung Sun Kim; Seunghoon Baek; Beom-Soon Choi; Hee-Ju Yu; Dae-Soo Kim; Namshin Kim; Ki-Byung Lim; Soo-In Lee; Jang-Ho Hahn; Yong Pyo Lim; Ian Bancroft; Beom-Seok Park
Journal:  Genome Biol       Date:  2009-10-12       Impact factor: 13.583

10.  Promoter variation and transcript divergence in Brassicaceae lineages of FLOWERING LOCUS T.

Authors:  Jing Wang; Clare J Hopkins; Jinna Hou; Xiaoxiao Zou; Chongnan Wang; Yan Long; Smita Kurup; Graham J King; Jinling Meng
Journal:  PLoS One       Date:  2012-10-11       Impact factor: 3.240

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