Literature DB >> 16686544

Carbonic anhydrase activators. Activation of isoforms I, II, IV, VA, VII, and XIV with L- and D-phenylalanine and crystallographic analysis of their adducts with isozyme II: stereospecific recognition within the active site of an enzyme and its consequences for the drug design.

Claudia Temperini1, Andrea Scozzafava, Daniela Vullo, Claudiu T Supuran.   

Abstract

Activation of six human brain carbonic anhydrases (hCAs, EC 4.2.1.1), hCA I, II, IV, VA, VII, and XIV, with l-/d-phenylalanine was investigated kinetically and by X-ray crystallography. l-Phe was a potent activator of isozymes I, II, and XIV (K(A)s of 13-240 nM), a weaker activator of hCA VA and VII (K(A)s of 9.8-10.9 microM), and a quite inefficient hCA IV activator (K(A) of 52 microM). d-Phe showed good hCA II activatory properties (K(A) of 35 nM), being a moderate hCA VA, VII, and XIV (K(A)s of 4.6-9.7 microM) and a weak hCA I and IV activator (K(A)s of 63-86 microM). X-ray crystallography of the hCA II-l-Phe/d-Phe adducts showed the activators to be anchored at the entrance of the active site, participating in numerous bonds and hydrophobic interactions with amino acid residues His64, Thr200, Trp5, and Pro201. This is the first study showing different binding modes of stereoisomeric activators within the hCA II active site, with consequences for overall proton transfer processes (rate-determining for the catalytic cycle). It also points out differences of activation efficiency between various isozymes with structurally related activators, exploitable for designing alternative proton transfer pathways. CA activators may lead to the design of pharmacologically useful derivatives for the enhancement of synaptic efficacy, which may represent a conceptually new approach for the treatment of Alzheimer's disease, aging, and other conditions in which spatial learning and memory therapy must be enhanced. As the blood and brain concentrations of l-Phe are quite variable (30-73 microM), activity of some brain CAs may strongly be influenced by the level of activator(s) present in such tissues.

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Year:  2006        PMID: 16686544     DOI: 10.1021/jm0603320

Source DB:  PubMed          Journal:  J Med Chem        ISSN: 0022-2623            Impact factor:   7.446


  27 in total

Review 1.  Carbonic anhydrase as a model for biophysical and physical-organic studies of proteins and protein-ligand binding.

Authors:  Vijay M Krishnamurthy; George K Kaufman; Adam R Urbach; Irina Gitlin; Katherine L Gudiksen; Douglas B Weibel; George M Whitesides
Journal:  Chem Rev       Date:  2008-03       Impact factor: 60.622

2.  Crystal Structure of Carbonic Anhydrase II in Complex with an Activating Ligand: Implications in Neuronal Function.

Authors:  Avni Bhatt; Utpal K Mondal; Claudiu T Supuran; Marc A Ilies; Robert McKenna
Journal:  Mol Neurobiol       Date:  2018-02-08       Impact factor: 5.590

3.  The role of carbonic anhydrases in extinction of contextual fear memory.

Authors:  Scheila Daiane Schmidt; Alessia Costa; Barbara Rani; Eduarda Godfried Nachtigall; Maria Beatrice Passani; Fabrizio Carta; Alessio Nocentini; Jociane de Carvalho Myskiw; Cristiane Regina Guerino Furini; Claudiu T Supuran; Ivan Izquierdo; Patrizio Blandina; Gustavo Provensi
Journal:  Proc Natl Acad Sci U S A       Date:  2020-06-22       Impact factor: 11.205

4.  Location of binding sites in small molecule rescue of human carbonic anhydrase II.

Authors:  Deepa Bhatt; S Zoë Fisher; Chingkuang Tu; Robert McKenna; David N Silverman
Journal:  Biophys J       Date:  2006-10-27       Impact factor: 4.033

5.  Tracking solvent and protein movement during CO2 release in carbonic anhydrase II crystals.

Authors:  Chae Un Kim; HyoJin Song; Balendu Sankara Avvaru; Sol M Gruner; SangYoun Park; Robert McKenna
Journal:  Proc Natl Acad Sci U S A       Date:  2016-04-25       Impact factor: 11.205

6.  Active-site solvent replenishment observed during human carbonic anhydrase II catalysis.

Authors:  Jin Kyun Kim; Carrie L Lomelino; Balendu Sankara Avvaru; Brian P Mahon; Robert McKenna; SangYoun Park; Chae Un Kim
Journal:  IUCrJ       Date:  2018-01-01       Impact factor: 4.769

7.  Activation Profile Analysis of CruCA4, an α-Carbonic Anhydrase Involved in Skeleton Formation of the Mediterranean Red Coral, Corallium rubrum.

Authors:  Sonia Del Prete; Daniela Vullo; Didier Zoccola; Sylvie Tambutté; Claudiu T Supuran; Clemente Capasso
Journal:  Molecules       Date:  2017-12-28       Impact factor: 4.411

8.  A class of carbonic anhydrase I - selective activators.

Authors:  Erol Licsandru; Muhammet Tanc; Istvan Kocsis; Mihail Barboiu; Claudiu T Supuran
Journal:  J Enzyme Inhib Med Chem       Date:  2016-11-01       Impact factor: 5.051

9.  Activation of β- and γ-carbonic anhydrases from pathogenic bacteria with tripeptides.

Authors:  Azzurra Stefanucci; Andrea Angeli; Marilisa Pia Dimmito; Grazia Luisi; Sonia Del Prete; Clemente Capasso; William A Donald; Adriano Mollica; Claudiu T Supuran
Journal:  J Enzyme Inhib Med Chem       Date:  2018-12       Impact factor: 5.051

10.  Synthesis and biological evaluation of histamine Schiff bases as carbonic anhydrase I, II, IV, VII, and IX activators.

Authors:  Suleyman Akocak; Nabih Lolak; Daniela Vullo; Mustafa Durgun; Claudiu T Supuran
Journal:  J Enzyme Inhib Med Chem       Date:  2017-12       Impact factor: 5.051

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