Literature DB >> 16685844

A Hamilton-Jacobi-Bellman approach to high angular resolution diffusion tractography.

Eric Pichon1, Carl-Fredrik Westin, Allen R Tannenbaum.   

Abstract

This paper describes a new framework for white matter tractography in high angular resolution diffusion data. A direction-dependent local cost is defined based on the diffusion data for every direction on the unit sphere. Minimum cost curves are determined by solving the Hamilton-Jacobi-Bellman using an efficient algorithm. Classical costs based on the diffusion tensor field can be seen as a special case. While the minimum cost (or equivalently the travel time of a particle moving along the curve) and the anisotropic front propagation frameworks are related, front speed is related to particle speed through a Legendre transformation which can severely impact anisotropy information for front propagation techniques. Implementation details and results on high angular diffusion data show that this method can successfully take advantage of the increased angular resolution in high b-value diffusion weighted data despite lower signal to noise ratio.

Mesh:

Year:  2005        PMID: 16685844      PMCID: PMC3644396          DOI: 10.1007/11566465_23

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  7 in total

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Authors:  P J Basser; S Pajevic; C Pierpaoli; J Duda; A Aldroubi
Journal:  Magn Reson Med       Date:  2000-10       Impact factor: 4.668

2.  Characterizing non-Gaussian diffusion by using generalized diffusion tensors.

Authors:  Chunlei Liu; Roland Bammer; Burak Acar; Michael E Moseley
Journal:  Magn Reson Med       Date:  2004-05       Impact factor: 4.668

3.  Q-ball imaging.

Authors:  David S Tuch
Journal:  Magn Reson Med       Date:  2004-12       Impact factor: 4.668

4.  Three-dimensional tracking of axonal projections in the brain by magnetic resonance imaging.

Authors:  S Mori; B J Crain; V P Chacko; P C van Zijl
Journal:  Ann Neurol       Date:  1999-02       Impact factor: 10.422

5.  MR diffusion tensor spectroscopy and imaging.

Authors:  P J Basser; J Mattiello; D LeBihan
Journal:  Biophys J       Date:  1994-01       Impact factor: 4.033

6.  Tracking neuronal fiber pathways in the living human brain.

Authors:  T E Conturo; N F Lori; T S Cull; E Akbudak; A Z Snyder; J S Shimony; R C McKinstry; H Burton; M E Raichle
Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-31       Impact factor: 11.205

7.  Estimating distributed anatomical connectivity using fast marching methods and diffusion tensor imaging.

Authors:  Geoffrey J M Parker; Claudia A M Wheeler-Kingshott; Gareth J Barker
Journal:  IEEE Trans Med Imaging       Date:  2002-05       Impact factor: 10.048

  7 in total
  21 in total

1.  Fiber bundle estimation and parameterization.

Authors:  Marc Niethammer; Sylvain Bouix; Carl-Fredrik Westin; Martha E Shenton
Journal:  Med Image Comput Comput Assist Interv       Date:  2006

2.  Finsler tractography for white matter connectivity analysis of the cingulum bundle.

Authors:  John Melonakos; Vandana Mohan; Marc Niethammer; Kate Smith; Marek Kubicki; Allen Tannenbaum
Journal:  Med Image Comput Comput Assist Interv       Date:  2007

3.  Finsler active contours.

Authors:  John Melonakos; Eric Pichon; Sigurd Angenent; Allen Tannenbaum
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2008-03       Impact factor: 6.226

4.  Probabilistic topography of human corpus callosum using cytoarchitectural parcellation and high angular resolution diffusion imaging tractography.

Authors:  Yi-Ping Chao; Kuan-Hung Cho; Chun-Hung Yeh; Kun-Hsien Chou; Jyh-Horng Chen; Ching-Po Lin
Journal:  Hum Brain Mapp       Date:  2009-10       Impact factor: 5.038

5.  Probabilistic white matter fiber tracking using particle filtering and von Mises-Fisher sampling.

Authors:  Fan Zhang; Edwin R Hancock; Casey Goodlett; Guido Gerig
Journal:  Med Image Anal       Date:  2008-06-05       Impact factor: 8.545

6.  Cortico-cortical, cortico-striatal, and cortico-thalamic white matter fiber tracts generated in the macaque brain via dynamic programming.

Authors:  J Tilak Ratnanather; Rakesh M Lal; Michael An; Clare B Poynton; Muwei Li; Hangyi Jiang; Kenichi Oishi; Lynn D Selemon; Susumu Mori; Michael I Miller
Journal:  Brain Connect       Date:  2013-09-18

7.  Locally-Constrained Region-Based Methods for DW-MRI Segmentation.

Authors:  John Melonakos; Marc Niethammer; Vandana Mohan; Marek Kubicki; James V Miller; Allen Tannenbaum
Journal:  Proc IEEE Int Conf Comput Vis       Date:  2007

8.  Adaptive Riemannian metrics for improved geodesic tracking of white matter.

Authors:  Xiang Hao; Ross T Whitaker; P Thomas Fletcher
Journal:  Inf Process Med Imaging       Date:  2011

9.  Globally Optimal Finsler Active Contours.

Authors:  Christopher Zach; Liang Shan; Marc Niethammer
Journal:  Pattern Recognit DAGM       Date:  2009

10.  Improved segmentation of white matter tracts with adaptive Riemannian metrics.

Authors:  Xiang Hao; Kristen Zygmunt; Ross T Whitaker; P Thomas Fletcher
Journal:  Med Image Anal       Date:  2013-10-25       Impact factor: 8.545

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