Literature DB >> 16682434

Structure activity relationships of monocyte chemoattractant proteins in complex with a blocking antibody.

Carl Reid1, Mia Rushe, Matthew Jarpe, Herman van Vlijmen, Brian Dolinski, Fang Qian, Teresa G Cachero, Hernan Cuervo, Milka Yanachkova, Chioma Nwankwo, Xin Wang, Natalie Etienne, Ellen Garber, Véronique Bailly, Antonin de Fougerolles, P Ann Boriack-Sjodin.   

Abstract

Monocyte chemoattractant proteins (MCPs) are cytokines that direct immune cells bearing appropriate receptors to sites of inflammation or injury and are therefore attractive therapeutic targets for inhibitory molecules. 11K2 is a blocking mouse monoclonal antibody active against several human and murine MCPs. A 2.5 A structure of the Fab fragment of this antibody in complex with human MCP-1 has been solved. The Fab blocks CCR2 receptor binding to MCP-1 through an adjacent but distinct binding site. The orientation of the Fab indicates that a single MCP-1 dimer will bind two 11K2 antibodies. Several key residues on the antibody and on human MCPs were predicted to be involved in antibody selectivity. Mutational analysis of these residues confirms their involvement in the antibody-chemokine interaction. In addition to mutations that decreased or disrupted binding, one antibody mutation resulted in a 70-fold increase in affinity for human MCP-2. A key residue missing in human MCP-3, a chemokine not recognized by the antibody, was identified and engineering the preferred residue into the chemokine conferred binding to the antibody.

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Year:  2006        PMID: 16682434     DOI: 10.1093/protein/gzl015

Source DB:  PubMed          Journal:  Protein Eng Des Sel        ISSN: 1741-0126            Impact factor:   1.650


  14 in total

1.  Soluble overexpression and purification of bioactive human CCL2 in E. coli by maltose-binding protein.

Authors:  Thu Trang Thi Vu; Bon-Kyung Koo; Jung-A Song; Seon-Ha Chong; Cho Rong Park; Minh Tan Nguyen; Boram Jeong; Han-Bong Ryu; Jae Young Seong; Yeon Jin Jang; Robert Charles Robinson; Han Choe
Journal:  Mol Biol Rep       Date:  2014-11-13       Impact factor: 2.316

2.  Structural basis for the recognition of C20:2-αGalCer by the invariant natural killer T cell receptor-like antibody L363.

Authors:  Esther Dawen Yu; Enrico Girardi; Jing Wang; Thien-Thi Mac; Karl O A Yu; Serge Van Calenbergh; Steven A Porcelli; Dirk M Zajonc
Journal:  J Biol Chem       Date:  2011-11-22       Impact factor: 5.157

3.  Dual specificity of anti-CXCL10-CXCL9 antibodies is governed by structural mimicry.

Authors:  Séverine Fagète; François Rousseau; Giovanni Magistrelli; Franck Gueneau; Ulla Ravn; Marie H Kosco-Vilbois; Nicolas Fischer
Journal:  J Biol Chem       Date:  2011-10-31       Impact factor: 5.157

Review 4.  Monocyte chemoattractant protein-1 (MCP-1): an overview.

Authors:  Satish L Deshmane; Sergey Kremlev; Shohreh Amini; Bassel E Sawaya
Journal:  J Interferon Cytokine Res       Date:  2009-06       Impact factor: 2.607

Review 5.  Practically useful: what the Rosetta protein modeling suite can do for you.

Authors:  Kristian W Kaufmann; Gordon H Lemmon; Samuel L Deluca; Jonathan H Sheehan; Jens Meiler
Journal:  Biochemistry       Date:  2010-04-13       Impact factor: 3.162

6.  Specificity tuning of antibody fragments to neutralize two human chemokines with a single agent.

Authors:  Séverine Fagète; Ulla Ravn; Franck Gueneau; Giovanni Magistrelli; Marie H Kosco-Vilbois; Nicolas Fischer
Journal:  MAbs       Date:  2009 May-Jun       Impact factor: 5.857

7.  Crystal structure of a mirror-image L-RNA aptamer (Spiegelmer) in complex with the natural L-protein target CCL2.

Authors:  Dominik Oberthür; John Achenbach; Azat Gabdulkhakov; Klaus Buchner; Christian Maasch; Sven Falke; Dirk Rehders; Sven Klussmann; Christian Betzel
Journal:  Nat Commun       Date:  2015-04-22       Impact factor: 14.919

8.  SnugDock: paratope structural optimization during antibody-antigen docking compensates for errors in antibody homology models.

Authors:  Aroop Sircar; Jeffrey J Gray
Journal:  PLoS Comput Biol       Date:  2010-01-22       Impact factor: 4.475

9.  A novel highly potent therapeutic antibody neutralizes multiple human chemokines and mimics viral immune modulation.

Authors:  Michelle L Scalley-Kim; Bruce W Hess; Ryan L Kelly; Anne-Rachel F Krostag; Kurt H Lustig; John S Marken; Pamela J Ovendale; Aaron R Posey; Pamela J Smolak; Janelle D L Taylor; C L Wood; David L Bienvenue; Peter Probst; Ruth A Salmon; Daniel S Allison; Teresa M Foy; Carol J Raport
Journal:  PLoS One       Date:  2012-08-17       Impact factor: 3.240

10.  Molecular basis of lateral force spectroscopy nano-diagnostics: computational unbinding of autism related chemokine MCP-1 from IgG antibody.

Authors:  Anna Gogolinska; Wieslaw Nowak
Journal:  J Mol Model       Date:  2013-09-06       Impact factor: 1.810

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