Literature DB >> 16675881

The fractal dimension of nuclear chromatin as a prognostic factor in acute precursor B lymphoblastic leukemia.

Randall L Adam1, Rosana C Silva, Fernanda G Pereira, Neucimar J Leite, Irene Lorand-Metze, Konradin Metze.   

Abstract

The fractal nature of the DNA arrangement has been postulated to be a common feature of all cell nuclei. We investigated the prognostic importance of the fractal dimension (FD) of chromatin in blasts of patients with acute precursor B lymphoblastic leukemia (B-ALL). In 28 patients, gray scale transformed pseudo-3D images of 100 nuclei (May-Grünwald-Giemsa stained bone marrow smears) were analyzed. FD was determined by the Minkowski-Bouligand method extended to three dimensions. Goodness-of-fit of FD was estimated by the R2 values in the log-log plots. Whereas FD presented no prognostic relevance, patients with higher R2 values showed a prolonged survival. White blood cell count (WBC), age and mean fluorescence intensity of CD45 (MFICD45) were all unfavorable prognostic factors in univariate analyses. In a multivariate Cox-regression, R2, WBC, and MFICD45, entered the final model, which showed to be stable in a bootstrap resampling study. Blasts with lower R2 values, equivalent to accentuated "coarseness" of the chromatin pattern, which may reflect profound changes of the DNA methylation, indicated a poor prognosis. In conclusion the goodness-of-fit of the Minkowski-Bouligand dimension of chromatin can be regarded as a new and biologically relevant prognostic factor for patients with B-ALL.

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Year:  2006        PMID: 16675881      PMCID: PMC4615964          DOI: 10.1155/2006/409593

Source DB:  PubMed          Journal:  Cell Oncol        ISSN: 1570-5870            Impact factor:   6.730


  13 in total

1.  Chromatin texture is size dependent in follicular adenomas but not in hyperplastic nodules of the thyroid.

Authors:  Konradin Metze; Rita C Ferreira; Randall L Adam; Neucimar J Leite; Laura S Ward; Patrícia S de Matos
Journal:  World J Surg       Date:  2008-12       Impact factor: 3.352

2.  Nuclear morphometry and chromatin textural characteristics of basal cell carcinoma.

Authors:  Paola Jung Mendaçolli; Gabrielli Brianezi; Juliano Vilaverde Schmitt; Mariângela Esther Alencar Marques; Hélio Amante Miot
Journal:  An Bras Dermatol       Date:  2015 Nov-Dec       Impact factor: 1.896

3.  Chromatin changes in papillary thyroid carcinomas may predict patient outcome.

Authors:  R C Ferreira; L L Cunha; P S Matos; R L Adam; F Soares; J Vassallo; L S Ward
Journal:  Cell Oncol (Dordr)       Date:  2012-12-05       Impact factor: 6.730

4.  The hierarchical packing of euchromatin domains can be described as multiplicative cascades.

Authors:  Amra Noa; Hui-Shun Kuan; Vera Aschmann; Vasily Zaburdaev; Lennart Hilbert
Journal:  PLoS Comput Biol       Date:  2021-05-05       Impact factor: 4.475

5.  Fractal dimension of chromatin is an independent prognostic factor for survival in melanoma.

Authors:  Valcinir Bedin; Randall L Adam; Bianca Cs de Sá; Gilles Landman; Konradin Metze
Journal:  BMC Cancer       Date:  2010-06-05       Impact factor: 4.430

6.  The impact of maternal HIV infection on cord blood lymphocyte subsets and cytokine profile in exposed non-infected newborns.

Authors:  Eliane Borges-Almeida; Helaine M B P M Milanez; Maria Marluce S Vilela; Fernanda G P Cunha; Beatriz M Abramczuk; Suiellen C Reis-Alves; Konradin Metze; Irene Lorand-Metze
Journal:  BMC Infect Dis       Date:  2011-02-03       Impact factor: 3.090

7.  Fractal characteristics of May-Grünwald-Giemsa stained chromatin are independent prognostic factors for survival in multiple myeloma.

Authors:  Daniela P Ferro; Monica A Falconi; Randall L Adam; Manoela M Ortega; Carmen P Lima; Carmino A de Souza; Irene Lorand-Metze; Konradin Metze
Journal:  PLoS One       Date:  2011-06-16       Impact factor: 3.240

8.  Computerized texture analysis of atypical immature myeloid precursors in patients with myelodysplastic syndromes: an entity between blasts and promyelocytes.

Authors:  Joyce R Vido; Randall L Adam; Irene G H Lorand-Metze; Konradin Metze
Journal:  Diagn Pathol       Date:  2011-09-29       Impact factor: 2.644

9.  Sequence Complexity of Chromosome 3 in Caenorhabditis elegans.

Authors:  Gaetano Pierro
Journal:  Adv Bioinformatics       Date:  2012-07-20

10.  Molecular characteristics and chromatin texture features in acute promyelocytic leukemia.

Authors:  Mariana R B De Mello; Dulcineia M Albuquerque; Fernanda Gonçalves Pereira-Cunha; Krizzia B Albanez; Katia B B Pagnano; Fernando F Costa; Konradin Metze; Irene Lorand-Metze
Journal:  Diagn Pathol       Date:  2012-06-28       Impact factor: 2.644

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