Literature DB >> 16669760

Laser microdissection of plant tissue: what you see is what you get.

Timothy Nelson1, S Lori Tausta, Neeru Gandotra, Tie Liu.   

Abstract

Laser microdissection (LM) utilizes a cutting or harvesting laser to isolate specific cells from histological sections; the process is guided by microscopy. This provides a means of removing selected cells from complex tissues, based only on their identification by microscopic appearance, location, or staining properties (e.g., immunohistochemistry, reporter gene expression, etc.). Cells isolated by LM can be a source of cell-specific DNA, RNA, protein or metabolites for subsequent evaluation of DNA modifications, transcript/protein/metabolite profiling, or other cell-specific properties that would be averaged with those of neighboring cell types during analysis of undissected complex tissues. Plants are particularly amenable to the application of LM; the highly regular tissue organization and stable cell walls of plants facilitate the visual identification of most cell types even in unstained tissue sections. Plant cells isolated by LM have been the starting point for a variety of genomic and metabolite studies of specific cell types.

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Year:  2006        PMID: 16669760     DOI: 10.1146/annurev.arplant.56.032604.144138

Source DB:  PubMed          Journal:  Annu Rev Plant Biol        ISSN: 1543-5008            Impact factor:   26.379


  36 in total

Review 1.  Using genomics to study legume seed development.

Authors:  Brandon H Le; Javier A Wagmaister; Tomokazu Kawashima; Anhthu Q Bui; John J Harada; Robert B Goldberg
Journal:  Plant Physiol       Date:  2007-06       Impact factor: 8.340

Review 2.  Systems approaches to identifying gene regulatory networks in plants.

Authors:  Terri A Long; Siobhan M Brady; Philip N Benfey
Journal:  Annu Rev Cell Dev Biol       Date:  2008       Impact factor: 13.827

3.  A method for obtaining high quality RNA from paraffin sections of plant tissues by laser microdissection.

Authors:  Hirokazu Takahashi; Hisae Kamakura; Yutaka Sato; Katsuhiro Shiono; Tomomi Abiko; Nobuhiro Tsutsumi; Yoshiaki Nagamura; Naoko K Nishizawa; Mikio Nakazono
Journal:  J Plant Res       Date:  2010-03-11       Impact factor: 2.629

Review 4.  Laser assisted microdissection, an efficient technique to understand tissue specific gene expression patterns and functional genomics in plants.

Authors:  Vibhav Gautam; Ananda K Sarkar
Journal:  Mol Biotechnol       Date:  2015-04       Impact factor: 2.695

5.  Laser microdissection of tomato fruit cell and tissue types for transcriptome profiling.

Authors:  Laetitia B B Martin; Philippe Nicolas; Antonio J Matas; Yoshihito Shinozaki; Carmen Catalá; Jocelyn K C Rose
Journal:  Nat Protoc       Date:  2016-11-03       Impact factor: 13.491

6.  Transcriptome analysis of proliferating Arabidopsis endosperm reveals biological implications for the control of syncytial division, cytokinin signaling, and gene expression regulation.

Authors:  Robert C Day; Rowan P Herridge; Barbara A Ambrose; Richard C Macknight
Journal:  Plant Physiol       Date:  2008-10-15       Impact factor: 8.340

7.  Ontogeny of the maize shoot apical meristem.

Authors:  Elizabeth M Takacs; Jie Li; Chuanlong Du; Lalit Ponnala; Diane Janick-Buckner; Jianming Yu; Gary J Muehlbauer; Patrick S Schnable; Marja C P Timmermans; Qi Sun; Dan Nettleton; Michael J Scanlon
Journal:  Plant Cell       Date:  2012-08-21       Impact factor: 11.277

8.  A transcriptome atlas of rice cell types uncovers cellular, functional and developmental hierarchies.

Authors:  Yuling Jiao; S Lori Tausta; Neeru Gandotra; Ning Sun; Tie Liu; Nicole K Clay; Teresa Ceserani; Meiqin Chen; Ligeng Ma; Matthew Holford; Hui-yong Zhang; Hongyu Zhao; Xing-Wang Deng; Timothy Nelson
Journal:  Nat Genet       Date:  2009-01-04       Impact factor: 38.330

9.  Stamen abscission zone transcriptome profiling reveals new candidates for abscission control: enhanced retention of floral organs in transgenic plants overexpressing Arabidopsis ZINC FINGER PROTEIN2.

Authors:  Suqin Cai; Coralie C Lashbrook
Journal:  Plant Physiol       Date:  2008-01-11       Impact factor: 8.340

10.  Comparative transcriptional survey between laser-microdissected cells from laminar abscission zone and petiolar cortical tissue during ethylene-promoted abscission in citrus leaves.

Authors:  Javier Agustí; Paz Merelo; Manuel Cercós; Francisco R Tadeo; Manuel Talón
Journal:  BMC Plant Biol       Date:  2009-10-23       Impact factor: 4.215

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