Literature DB >> 16669756

Quantitative fluorescence microscopy: from art to science.

Mark Fricker1, John Runions, Ian Moore.   

Abstract

A substantial number of elegant experimental approaches have been developed to image the distribution and dynamics of DNA, mRNA, proteins, organelles, metabolites, and ions in living plant cells. Although the human brain can rapidly assimilate visual information, particularly when presented as animations and movies, it is much more challenging to condense the phenomenal amount of data present in three-, four-, or even five-dimensional images into statistically useful measurements. This review explores a range of in vivo fluorescence imaging applications in plants, with particular emphasis on where quantitative techniques are beginning to emerge.

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Year:  2006        PMID: 16669756     DOI: 10.1146/annurev.arplant.57.032905.105239

Source DB:  PubMed          Journal:  Annu Rev Plant Biol        ISSN: 1543-5008            Impact factor:   26.379


  18 in total

Review 1.  Comparative physiology of elemental distributions in plants.

Authors:  Simon Conn; Matthew Gilliham
Journal:  Ann Bot       Date:  2010-04-21       Impact factor: 4.357

2.  Imaging in real-time with FRET the redox response of tumorigenic cells to glutathione perturbations in a microscale flow.

Authors:  Chunchen Lin; Vladimir L Kolossov; Gene Tsvid; Lisa Trump; Jennifer Jo Henry; Jerrod L Henderson; Laurie A Rund; Paul J A Kenis; Lawrence B Schook; H Rex Gaskins; Gregory Timp
Journal:  Integr Biol (Camb)       Date:  2010-12-23       Impact factor: 2.192

3.  Combination of novel green fluorescent protein mutant TSapphire and DsRed variant mOrange to set up a versatile in planta FRET-FLIM assay.

Authors:  Vincent Bayle; Laurent Nussaume; Riyaz A Bhat
Journal:  Plant Physiol       Date:  2008-07-11       Impact factor: 8.340

4.  Validating the location of fluorescent protein fusions in the endomembrane system.

Authors:  Ian Moore; Angus Murphy
Journal:  Plant Cell       Date:  2009-06-26       Impact factor: 11.277

Review 5.  Optical microscopy in photosynthesis.

Authors:  Richard Cisek; Leigh Spencer; Nicole Prent; Donatas Zigmantas; George S Espie; Virginijus Barzda
Journal:  Photosynth Res       Date:  2009-10-23       Impact factor: 3.573

Review 6.  Techniques for the Analysis of Protein-Protein Interactions in Vivo.

Authors:  Shuping Xing; Niklas Wallmeroth; Kenneth W Berendzen; Christopher Grefen
Journal:  Plant Physiol       Date:  2016-04-25       Impact factor: 8.340

7.  Detection of nucleic acid-protein interactions in plant leaves using fluorescence lifetime imaging microscopy.

Authors:  Laurent Camborde; Alain Jauneau; Christian Brière; Laurent Deslandes; Bernard Dumas; Elodie Gaulin
Journal:  Nat Protoc       Date:  2017-08-24       Impact factor: 13.491

8.  High-throughput tracking of single yeast cells in a microfluidic imaging matrix.

Authors:  D Falconnet; A Niemistö; R J Taylor; M Ricicova; T Galitski; I Shmulevich; C L Hansen
Journal:  Lab Chip       Date:  2010-11-18       Impact factor: 6.799

9.  HAB1-SWI3B interaction reveals a link between abscisic acid signaling and putative SWI/SNF chromatin-remodeling complexes in Arabidopsis.

Authors:  Angela Saez; Americo Rodrigues; Julia Santiago; Silvia Rubio; Pedro L Rodriguez
Journal:  Plant Cell       Date:  2008-11-25       Impact factor: 11.277

10.  A method for quantification of vesicular compartments within cells using 3D reconstructed confocal z-stacks: Comparison of ImageJ and Imaris to count early endosomes within basal forebrain cholinergic neurons.

Authors:  Megan K Gautier; Stephen D Ginsberg
Journal:  J Neurosci Methods       Date:  2020-12-15       Impact factor: 2.390

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