Literature DB >> 16647714

Binding of TmHU to single dsDNA as observed by optical tweezers.

M Salomo1, K Kroy, K Kegler, C Gutsche, M Struhalla, J Reinmuth, W Skokov, C Immisch, U Hahn, F Kremer.   

Abstract

Optical tweezers are employed to study the action of the histone-like protein from Thermotoga maritima (TmHU) on DNA at a single molecule level. Binding and disruption of TmHU to and from DNA are found to take place in discrete steps of 4-5 nm length and a net binding enthalpy of about 16kBT. This is in reasonable agreement with a microscopic model that estimates the extension of the binding sites of the protein and evaluates the energetics mainly for bending of the DNA in the course of interaction.

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Year:  2006        PMID: 16647714     DOI: 10.1016/j.jmb.2006.04.006

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  6 in total

1.  DNA condensation by TmHU studied by optical tweezers, AFM and molecular dynamics simulations.

Authors:  Carolin Wagner; Carsten Olbrich; Hergen Brutzer; Mathias Salomo; Ulrich Kleinekathöfer; Ulrich F Keyser; Friedrich Kremer
Journal:  J Biol Phys       Date:  2010-10-09       Impact factor: 1.365

2.  Optical tweezers to study single protein A/immunoglobulin G interactions at varying conditions.

Authors:  Mathias Salomo; Ulrich F Keyser; Marc Struhalla; Friedrich Kremer
Journal:  Eur Biophys J       Date:  2008-04-01       Impact factor: 1.733

Review 3.  Biophysical characterization of DNA binding from single molecule force measurements.

Authors:  Kathy R Chaurasiya; Thayaparan Paramanathan; Micah J McCauley; Mark C Williams
Journal:  Phys Life Rev       Date:  2010-06-04       Impact factor: 11.025

4.  Determination of the number of proteins bound non-specifically to DNA.

Authors:  Paul Liebesny; Sachin Goyal; David Dunlap; Fereydoon Family; Laura Finzi
Journal:  J Phys Condens Matter       Date:  2010-09-30       Impact factor: 2.333

5.  HMGB binding to DNA: single and double box motifs.

Authors:  Micah J McCauley; Jeff Zimmerman; L James Maher; Mark C Williams
Journal:  J Mol Biol       Date:  2007-09-29       Impact factor: 5.469

6.  DNA protection by histone-like protein HU from the hyperthermophilic eubacterium Thermotoga maritima.

Authors:  Anirban Mukherjee; Abimbola O Sokunbi; Anne Grove
Journal:  Nucleic Acids Res       Date:  2008-05-30       Impact factor: 16.971

  6 in total

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