Literature DB >> 16642181

Automated determination of the center of rotation in tomography data.

Tilman Donath1, Felix Beckmann, Andreas Schreyer.   

Abstract

Tomographic reconstruction requires precise knowledge of the position of the center of rotation in the sinogram data; otherwise, artifacts are introduced into the reconstruction. In parallel-beam microtomography, where resolution in the 1 microm range is reached, the center of rotation is often only known with insufficient accuracy. We present three image metrics for the scoring of tomographic reconstructions and an iterative procedure for the determination of the position of the optimum center of rotation. The metrics are applied to model systems as well as to microtomography data from a synchrotron radiation source. The center of rotation is determined using the image metrics and compared with the results obtained by the center-of-mass method and by image registration. It is found that the image metrics make it possible to determine the axis position reliably at well below the resolution of one detector bin in an automated procedure.

Year:  2006        PMID: 16642181     DOI: 10.1364/josaa.23.001048

Source DB:  PubMed          Journal:  J Opt Soc Am A Opt Image Sci Vis        ISSN: 1084-7529            Impact factor:   2.129


  16 in total

1.  Alignment Solution for CT Image Reconstruction using Fixed Point and Virtual Rotation Axis.

Authors:  Kyungtaek Jun; Seokhwan Yoon
Journal:  Sci Rep       Date:  2017-01-25       Impact factor: 4.379

2.  Quantifying Mesoscale Neuroanatomy Using X-Ray Microtomography.

Authors:  Eva L Dyer; William Gray Roncal; Judy A Prasad; Hugo L Fernandes; Doga Gürsoy; Vincent De Andrade; Kamel Fezzaa; Xianghui Xiao; Joshua T Vogelstein; Chris Jacobsen; Konrad P Körding; Narayanan Kasthuri
Journal:  eNeuro       Date:  2017-10-16

3.  Rapid alignment of nanotomography data using joint iterative reconstruction and reprojection.

Authors:  Doğa Gürsoy; Young P Hong; Kuan He; Karl Hujsak; Seunghwan Yoo; Si Chen; Yue Li; Mingyuan Ge; Lisa M Miller; Yong S Chu; Vincent De Andrade; Kai He; Oliver Cossairt; Aggelos K Katsaggelos; Chris Jacobsen
Journal:  Sci Rep       Date:  2017-09-18       Impact factor: 4.379

4.  Tomosaic: efficient acquisition and reconstruction of teravoxel tomography data using limited-size synchrotron X-ray beams.

Authors:  Rafael Vescovi; Ming Du; Vincent de Andrade; William Scullin; Dogˇa Gürsoy; Chris Jacobsen
Journal:  J Synchrotron Radiat       Date:  2018-08-21       Impact factor: 2.616

5.  Correction of center of rotation and projection angle in synchrotron X-ray computed tomography.

Authors:  Chang-Chieh Cheng; Yu-Tai Ching; Pai-Hung Ko; Yeukuang Hwu
Journal:  Sci Rep       Date:  2018-06-29       Impact factor: 4.379

6.  Automatic projection image registration for nanoscale X-ray tomographic reconstruction.

Authors:  Haiyan Yu; Sihao Xia; Chenxi Wei; Yuwei Mao; Daniel Larsson; Xianghui Xiao; Piero Pianetta; Young Sang Yu; Yijin Liu
Journal:  J Synchrotron Radiat       Date:  2018-10-23       Impact factor: 2.616

7.  Analysis and Correction of Dynamic Geometric Misalignment for Nano-Scale Computed Tomography at BSRF.

Authors:  Jian Fu; Chen Li; Zhenzhong Liu
Journal:  PLoS One       Date:  2015-10-28       Impact factor: 3.240

8.  Tomography of a Cryo-immobilized Yeast Cell Using Ptychographic Coherent X-Ray Diffractive Imaging.

Authors:  K Giewekemeyer; C Hackenberg; A Aquila; R N Wilke; M R Groves; R Jordanova; V S Lamzin; G Borchers; K Saksl; A V Zozulya; M Sprung; A P Mancuso
Journal:  Biophys J       Date:  2015-11-03       Impact factor: 4.033

9.  Integration of TomoPy and the ASTRA toolbox for advanced processing and reconstruction of tomographic synchrotron data.

Authors:  Daniël M Pelt; Dogˇa Gürsoy; Willem Jan Palenstijn; Jan Sijbers; Francesco De Carlo; Kees Joost Batenburg
Journal:  J Synchrotron Radiat       Date:  2016-04-28       Impact factor: 2.616

10.  Alignment theory of parallel-beam computed tomography image reconstruction for elastic-type objects using virtual focusing method.

Authors:  Kyungtaek Jun; Dongwook Kim
Journal:  PLoS One       Date:  2018-06-15       Impact factor: 3.240

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