Literature DB >> 16637636

Mechanism of thio acid/azide amidation.

Robert V Kolakowski1, Ning Shangguan, Ronald R Sauers, Lawrence J Williams.   

Abstract

A combined experimental and computational mechanistic study of amide formation from thio acids and azides is described. The data support two distinct mechanistic pathways dependent on the electronic character of the azide component. Relatively electron-rich azides undergo bimolecular coupling with thiocarboxylates via an anion-accelerated [3+2] cycloaddition to give a thiatriazoline. Highly electron-poor azides couple via bimolecular union of the terminal nitrogen of the azide with sulfur of the thiocarboxylate to give a linear adduct. Cyclization of this intermediate gives a thiatriazoline. Decomposition to amide is found to proceed via retro-[3+2] cycloaddition of the neutral thiatriazoline intermediates. Computational analysis (DFT, 6-31+G(d)) identified pathways by which both classes of azide undergo [3+2] cycloaddition with thio acid to give thiatriazoline intermediates, although these paths are higher in energy than the thiocarboxylate amidations. These studies also establish that the reaction profile of electron-poor azides is attributable to a prior capture mechanism followed by intramolecular acylation.

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Year:  2006        PMID: 16637636     DOI: 10.1021/ja057533y

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  16 in total

1.  Reagent for the detection of protein thiocarboxylates in the bacterial proteome: lissamine rhodamine B sulfonyl azide.

Authors:  Kalyanaraman Krishnamoorthy; Tadhg P Begley
Journal:  J Am Chem Soc       Date:  2010-08-25       Impact factor: 15.419

2.  Dihydro-3-(triphenylphosphoranylidene)-2,5-thiophendione: A Convenient Synthon for the Preparation of Substituted 1,4-Thiazepin-5-ones and Piperidinones via the Intermediacy of Thioacids.

Authors:  David Crich; Md Yeajur Rahaman
Journal:  Tetrahedron       Date:  2010-08-14       Impact factor: 2.457

3.  Thio acid-mediated conversion of azides to amides - exploratory studies en route to oroidin alkaloids.

Authors:  Apsara K Herath; Manoj R Bhandari; Delphine Gout; Muhammed Yousufuddin; Carl J Lovely
Journal:  Tetrahedron Lett       Date:  2017-08-24       Impact factor: 2.415

4.  Fully Synthetic Granulocyte Colony-Stimulating Factor Enabled by Isonitrile-Mediated Coupling of Large, Side-Chain-Unprotected Peptides.

Authors:  Andrew G Roberts; Eric V Johnston; Jae-Hung Shieh; Joseph P Sondey; Ronald C Hendrickson; Malcolm A S Moore; Samuel J Danishefsky
Journal:  J Am Chem Soc       Date:  2015-10-01       Impact factor: 15.419

5.  In situ carboxyl activation using a silatropic switch: a new approach to amide and peptide constructions.

Authors:  Wenting Wu; Zhihui Zhang; Lanny S Liebeskind
Journal:  J Am Chem Soc       Date:  2011-08-18       Impact factor: 15.419

6.  Screening of protein-protein interaction modulators via sulfo-click kinetic target-guided synthesis.

Authors:  Sameer S Kulkarni; Xiangdong Hu; Kenichiro Doi; Hong-Gang Wang; Roman Manetsch
Journal:  ACS Chem Biol       Date:  2011-05-05       Impact factor: 5.100

7.  Bcl-XL-templated assembly of its own protein-protein interaction modulator from fragments decorated with thio acids and sulfonyl azides.

Authors:  Xiangdong Hu; Jiazhi Sun; Hong-Gang Wang; Roman Manetsch
Journal:  J Am Chem Soc       Date:  2008-09-24       Impact factor: 15.419

8.  Reaction of thioacids with isocyanates and isothiocyanates: a convenient amide ligation process.

Authors:  David Crich; Kaname Sasaki
Journal:  Org Lett       Date:  2009-08-06       Impact factor: 6.005

9.  Tetrazine ligation: fast bioconjugation based on inverse-electron-demand Diels-Alder reactivity.

Authors:  Melissa L Blackman; Maksim Royzen; Joseph M Fox
Journal:  J Am Chem Soc       Date:  2008-09-18       Impact factor: 15.419

10.  Thiomaleic anhydride: a convenient building block for the synthesis of alpha-substituted gamma- and delta-lactones through free-radical addition, nucleophilic ring opening, and subsequent thiocarboxylate manipulation.

Authors:  David Crich; Md Yeajur Rahaman
Journal:  J Org Chem       Date:  2009-09-04       Impact factor: 4.354

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