Literature DB >> 16634624

Proton movement and photointermediate kinetics in rhodopsin mutants.

James W Lewis1, Istvan Szundi, Manija A Kazmi, Thomas P Sakmar, David S Kliger.   

Abstract

The role of ionizable amino acid side chains in the bovine rhodopsin activation mechanism was studied in mutants E134Q, E134R/R135E, H211F, and E122Q. All mutants exhibited bathorhodopsin stability on the 30 ns to 1 micros time scale similar to that of the wild type. Lumirhodopsin decay was also similar to that of the wild type except for the H211F mutant where early decay (20 micros) to a second form of lumirhodopsin was seen, followed by formation of an extremely long-lived Meta I(480) product (34 ms), an intermediate which forms to a much reduced extent, if at all, in dodecyl maltoside suspensions of wild-type rhodopsin. A smaller amount of a similar long-lived Meta I(480) product was seen after photolysis of E122Q, but E134Q and E134R/R135Q displayed kinetics much more similar to those of the wild type under these conditions (i.e., no Meta I(480) product). These results support the idea that specific interaction of His211 and Glu122 plays a significant role in deprotonation of the retinylidene Schiff base and receptor activation. Proton uptake measurements using bromcresol purple showed that E122Q was qualitatively similar to wild-type rhodopsin, with at least one proton being released during lumirhodopsin decay per Meta I(380) intermediate formed, followed by uptake of at least two protons per rhodopsin bleached on a time scale of tens of milliseconds. Different results were obtained for H211F, E134Q, and E134R/R135E, which all released approximately two protons per rhodopsin bleached. These results show that several ionizable groups besides the Schiff base imine are affected by the structural changes involved in rhodopsin activation. At least two proton uptake groups and probably at least one proton release group in addition to the Schiff base are present in rhodopsin.

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Year:  2006        PMID: 16634624      PMCID: PMC2527178          DOI: 10.1021/bi0525775

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  41 in total

1.  Absorption spectroscopy in studies of visual pigments: spectral and kinetic characterization of intermediates.

Authors:  J W Lewis; D S Kliger
Journal:  Methods Enzymol       Date:  2000       Impact factor: 1.600

2.  Introduction of hydroxyl-bearing amino acids causes bathochromic spectral shifts in rhodopsin. Amino acid substitutions responsible for red-green color pigment spectral tuning.

Authors:  T Chan; M Lee; T P Sakmar
Journal:  J Biol Chem       Date:  1992-05-15       Impact factor: 5.157

3.  Function of extracellular loop 2 in rhodopsin: glutamic acid 181 modulates stability and absorption wavelength of metarhodopsin II.

Authors:  Elsa C Y Yan; Manija A Kazmi; Soma De; Belinda S W Chang; Christoph Seibert; Ethan P Marin; Richard A Mathies; Thomas P Sakmar
Journal:  Biochemistry       Date:  2002-03-19       Impact factor: 3.162

4.  Kinetics and pH dependence of light-induced deprotonation of the Schiff base of rhodopsin: possible coupling to proton uptake and formation of the active form of Meta II.

Authors:  O Kuwata; C Yuan; S Misra; R Govindjee; T G Ebrey
Journal:  Biochemistry (Mosc)       Date:  2001-11       Impact factor: 2.487

5.  Steric barrier to bathorhodopsin decay in 5-demethyl and mesityl analogues of rhodopsin.

Authors:  J W Lewis; G B Fan; M Sheves; I Szundi; D S Kliger
Journal:  J Am Chem Soc       Date:  2001-10-17       Impact factor: 15.419

Review 6.  Rhodopsin: insights from recent structural studies.

Authors:  Thomas P Sakmar; Santosh T Menon; Ethan P Marin; Elias S Awad
Journal:  Annu Rev Biophys Biomol Struct       Date:  2001-10-25

7.  Transducin-dependent protonation of glutamic acid 134 in rhodopsin.

Authors:  K Fahmy; T P Sakmar; F Siebert
Journal:  Biochemistry       Date:  2000-08-29       Impact factor: 3.162

8.  Chromophore structure in lumirhodopsin and metarhodopsin I by time-resolved resonance Raman microchip spectroscopy.

Authors:  D Pan; R A Mathies
Journal:  Biochemistry       Date:  2001-07-03       Impact factor: 3.162

9.  Rhodopsin: structural basis of molecular physiology.

Authors:  S T Menon; M Han; T P Sakmar
Journal:  Physiol Rev       Date:  2001-10       Impact factor: 37.312

10.  Time-resolved resonance Raman analysis of chromophore structural changes in the formation and decay of rhodopsin's BSI intermediate.

Authors:  Duohai Pan; Ziad Ganim; Judy E Kim; Michiel A Verhoeven; Johan Lugtenburg; Richard A Mathies
Journal:  J Am Chem Soc       Date:  2002-05-01       Impact factor: 15.419

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  8 in total

1.  Rhodopsin in nanodiscs has native membrane-like photointermediates.

Authors:  Hisao Tsukamoto; Istvan Szundi; James W Lewis; David L Farrens; David S Kliger
Journal:  Biochemistry       Date:  2011-05-13       Impact factor: 3.162

2.  Electron paramagnetic resonance studies of functionally active, nitroxide spin-labeled peptide analogues of the C-terminus of a G-protein alpha subunit.

Authors:  Ned Van Eps; Lori L Anderson; Oleg G Kisselev; Thomas J Baranski; Wayne L Hubbell; Garland R Marshall
Journal:  Biochemistry       Date:  2010-08-17       Impact factor: 3.162

3.  Light activation of rhodopsin: insights from molecular dynamics simulations guided by solid-state NMR distance restraints.

Authors:  Viktor Hornak; Shivani Ahuja; Markus Eilers; Joseph A Goncalves; Mordechai Sheves; Philip J Reeves; Steven O Smith
Journal:  J Mol Biol       Date:  2009-12-11       Impact factor: 5.469

Review 4.  Amino acid conservation and interactions in rhodopsin: probing receptor activation by NMR spectroscopy.

Authors:  Andreyah Pope; Markus Eilers; Philip J Reeves; Steven O Smith
Journal:  Biochim Biophys Acta       Date:  2013-10-29

5.  A minimal ligand binding pocket within a network of correlated mutations identified by multiple sequence and structural analysis of G protein coupled receptors.

Authors:  Subhodeep Moitra; Kalyan C Tirupula; Judith Klein-Seetharaman; Christopher James Langmead
Journal:  BMC Biophys       Date:  2012-06-29       Impact factor: 4.778

Review 6.  Methodology of pulsed photoacoustics and its application to probe photosystems and receptors.

Authors:  Harvey J M Hou; Thomas P Sakmar
Journal:  Sensors (Basel)       Date:  2010-06-03       Impact factor: 3.576

Review 7.  Implications of short time scale dynamics on long time processes.

Authors:  Krystel El Hage; Sebastian Brickel; Sylvain Hermelin; Geoffrey Gaulier; Cédric Schmidt; Luigi Bonacina; Siri C van Keulen; Swarnendu Bhattacharyya; Majed Chergui; Peter Hamm; Ursula Rothlisberger; Jean-Pierre Wolf; Markus Meuwly
Journal:  Struct Dyn       Date:  2017-12-22       Impact factor: 2.920

8.  Chlorophyll-Derivative Modulation of Rhodopsin Signaling Properties through Evolutionarily Conserved Interaction Pathways.

Authors:  Kristina N Woods; Jürgen Pfeffer; Judith Klein-Seetharaman
Journal:  Front Mol Biosci       Date:  2017-12-12
  8 in total

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