Literature DB >> 16632507

Method of x-ray anomalous diffraction for lipid structures.

Wangchen Wang1, Deng Pan, Yang Song, Wenhan Liu, Lin Yang, Huey W Huang.   

Abstract

The structures of the unit cells of lipid phases that exhibit long-range crystalline order but short-range liquid-like disorder are of biological interests. In particular, the recently discovered rhombohedral phase has a unit cell containing either the structure of a membrane fusion intermediate state or that of a peptide-induced transmembrane pore, depending on the lipid composition and participating peptides. Diffraction from such systems generally presents a difficult phase problem. The existing methods of phase determination all have their limitations. Therefore it is of general interest to develop a new phasing method. The method of multi-wavelength anomalous dispersion is routinely used in protein crystallography, but the same method is difficult for lipid systems for the practical reason that the commonly used lipid samples for diffraction do not have a well-defined thickness. Here we describe a practical approach to use the multi-wavelength anomalous dispersion method for lipid structures. The procedure is demonstrated with the lamellar phase of a brominated lipid. The method is general to all phases as long as anomalous diffraction is applicable.

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Year:  2006        PMID: 16632507      PMCID: PMC1483071          DOI: 10.1529/biophysj.105.080267

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  22 in total

1.  Crystallization of antimicrobial pores in membranes: magainin and protegrin.

Authors:  L Yang; T M Weiss; R I Lehrer; H W Huang
Journal:  Biophys J       Date:  2000-10       Impact factor: 4.033

2.  Barrel-stave model or toroidal model? A case study on melittin pores.

Authors:  L Yang; T A Harroun; T M Weiss; L Ding; H W Huang
Journal:  Biophys J       Date:  2001-09       Impact factor: 4.033

3.  A rhombohedral phase of lipid containing a membrane fusion intermediate structure.

Authors:  Lin Yang; Huey W Huang
Journal:  Biophys J       Date:  2003-03       Impact factor: 4.033

4.  Two states of cyclic antimicrobial peptide RTD-1 in lipid bilayers.

Authors:  Thomas M Weiss; Lin Yang; Lai Ding; Alan J Waring; Robert I Lehrer; Huey W Huang
Journal:  Biochemistry       Date:  2002-08-06       Impact factor: 3.162

5.  Observation of a membrane fusion intermediate structure.

Authors:  Lin Yang; Huey W Huang
Journal:  Science       Date:  2002-09-13       Impact factor: 47.728

6.  Crystal structure of Clostridium acidi-urici ferredoxin at 5-A resolution based on measurements of anomalous X-ray scattering at multiple wavelengths.

Authors:  H M Murthy; W A Hendrickson; W H Orme-Johnson; E A Merritt; R P Phizackerley
Journal:  J Biol Chem       Date:  1988-12-05       Impact factor: 5.157

7.  Membrane thinning caused by magainin 2.

Authors:  S Ludtke; K He; H Huang
Journal:  Biochemistry       Date:  1995-12-26       Impact factor: 3.162

Review 8.  Structure of lipid bilayers.

Authors:  J F Nagle; S Tristram-Nagle
Journal:  Biochim Biophys Acta       Date:  2000-11-10

9.  Chain packing in the inverted hexagonal phase of phospholipids: a study by X-ray anomalous diffraction on bromine-labeled chains.

Authors:  Deng Pan; Wangchen Wang; Wenhan Liu; Lin Yang; Huey W Huang
Journal:  J Am Chem Soc       Date:  2006-03-22       Impact factor: 15.419

10.  New phases of phospholipids and implications to the membrane fusion problem.

Authors:  Lin Yang; Lai Ding; Huey W Huang
Journal:  Biochemistry       Date:  2003-06-10       Impact factor: 3.162

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  7 in total

1.  A novel phase of compressed bilayers that models the prestalk transition state of membrane fusion.

Authors:  Shuo Qian; Huey W Huang
Journal:  Biophys J       Date:  2012-01-03       Impact factor: 4.033

2.  Evidence of cholesterol accumulated in high curvature regions: implication to the curvature elastic energy for lipid mixtures.

Authors:  Wangchen Wang; Lin Yang; Huey W Huang
Journal:  Biophys J       Date:  2007-01-26       Impact factor: 4.033

3.  Structure of the alamethicin pore reconstructed by x-ray diffraction analysis.

Authors:  Shuo Qian; Wangchen Wang; Lin Yang; Huey W Huang
Journal:  Biophys J       Date:  2008-01-16       Impact factor: 4.033

4.  Structure of transmembrane pore induced by Bax-derived peptide: evidence for lipidic pores.

Authors:  Shuo Qian; Wangchen Wang; Lin Yang; Huey W Huang
Journal:  Proc Natl Acad Sci U S A       Date:  2008-11-05       Impact factor: 11.205

5.  Process of inducing pores in membranes by melittin.

Authors:  Ming-Tao Lee; Tzu-Lin Sun; Wei-Chin Hung; Huey W Huang
Journal:  Proc Natl Acad Sci U S A       Date:  2013-08-12       Impact factor: 11.205

6.  Rhombohedral trap for studying molecular oligomerization in membranes: application to daptomycin.

Authors:  Ming-Tao Lee; Wei-Chin Hung; Huey W Huang
Journal:  Soft Matter       Date:  2019-05-29       Impact factor: 3.679

7.  The condensing effect of cholesterol in lipid bilayers.

Authors:  Wei-Chin Hung; Ming-Tao Lee; Fang-Yu Chen; Huey W Huang
Journal:  Biophys J       Date:  2007-03-16       Impact factor: 4.033

  7 in total

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