Literature DB >> 16627945

Novel versatile cryoprotectants for heavy-atom derivatization of protein crystals.

Michihiro Sugahara1, Naoki Kunishima.   

Abstract

Determination of a suitable cryoprotectant agent condition is one of the time-consuming processes in protein X-ray crystallography. The adaptability of two novel versatile cryoprotectants (oil- and water-based types) has been evaluated by cryodiffraction experiments using crystals of five different proteins. The results suggest that complementary use of both oil- and water-based cryoprotectants enables the successful cryoprotection of protein crystals. Since the versatile cryoprotectants do not contain crystallization solution, rapid and efficient preparation of heavy-atom derivatives is possible with these cryoprotectants in the presence of heavy-atom reagents. Four heavy-atom reagents [K(2)PtCl(4), HgCl(2), KAu(CN)(2) and K(2)Pt(CN)(4)] were examined and could be stored with sufficient derivatizing capabilities for over one month in the versatile cryoprotectants.

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Year:  2006        PMID: 16627945     DOI: 10.1107/S0907444906009012

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  6 in total

1.  Potent inhibition of dinuclear zinc(II) peptidase, an aminopeptidase from Aeromonas proteolytica, by 8-quinolinol derivatives: inhibitor design based on Zn2+ fluorophores, kinetic, and X-ray crystallographic study.

Authors:  Kengo Hanaya; Miho Suetsugu; Shinya Saijo; Ichiro Yamato; Shin Aoki
Journal:  J Biol Inorg Chem       Date:  2012-02-05       Impact factor: 3.358

2.  High-throughput crystallization-to-structure pipeline at RIKEN SPring-8 Center.

Authors:  Michihiro Sugahara; Yukuhiko Asada; Katsumi Shimizu; Hitoshi Yamamoto; Neratur K Lokanath; Hisashi Mizutani; Bagautdin Bagautdinov; Yoshinori Matsuura; Midori Taketa; Yuichi Kageyama; Naoko Ono; Yuko Morikawa; Yukiko Tanaka; Hiroki Shimada; Takanobu Nakamoto; Mitsuaki Sugahara; Masaki Yamamoto; Naoki Kunishima
Journal:  J Struct Funct Genomics       Date:  2008-08-02

3.  Expression, purification, crystallization and preliminary X-ray analysis of Pseudomonas fluorescens AlgK.

Authors:  Carrie-Lynn Keiski; Patrick Yip; Howard Robinson; Lori L Burrows; P Lynne Howell
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2007-04-14

4.  Structural basis for the transcriptional regulation of heme homeostasis in Lactococcus lactis.

Authors:  Hitomi Sawai; Masaru Yamanaka; Hiroshi Sugimoto; Yoshitsugu Shiro; Shigetoshi Aono
Journal:  J Biol Chem       Date:  2012-07-13       Impact factor: 5.157

5.  Crystal structure, exogenous ligand binding, and redox properties of an engineered diiron active site in a bacterial hemerythrin.

Authors:  Yasunori Okamoto; Akira Onoda; Hiroshi Sugimoto; Yu Takano; Shun Hirota; Donald M Kurtz; Yoshitsugu Shiro; Takashi Hayashi
Journal:  Inorg Chem       Date:  2013-11-04       Impact factor: 5.165

6.  Autofluorescent proteins with excitation in the optical window for intravital imaging in mammals.

Authors:  Michael Z Lin; Michael R McKeown; Ho-Leung Ng; Todd A Aguilera; Nathan C Shaner; Robert E Campbell; Stephen R Adams; Larry A Gross; Wendy Ma; Tom Alber; Roger Y Tsien
Journal:  Chem Biol       Date:  2009-11-25
  6 in total

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