Literature DB >> 16627655

Description of Fabibacter halotolerans gen. nov., sp. nov. and Roseivirga spongicola sp. nov., and reclassification of [Marinicola] seohaensis as Roseivirga seohaensis comb. nov.

Stanley C K Lau1, Mandy M Y Tsoi1, Xiancui Li1, Ioulia Plakhotnikova1, Sergey Dobretsov1, Madeline Wu1, Po-Keung Wong2, Joseph R Pawlik3, Pei-Yuan Qian1.   

Abstract

Bacterial strains UST030701-097T and UST030701-084T were isolated from a marine sponge in the Bahamas. Both strains were pink-pigmented, Gram-negative, strictly aerobic and chemo-organotrophic. Cells of strain UST030701-097T were short, curved rods with fast-gliding motility, whereas those of strain UST030701-084T were straight rods with a less rapid gliding motion. The two strains had MK-7 as the major respiratory quinone and did not produce flexirubin-type pigments. The DNA G+C contents of strains UST030701-097T and UST030701-084T were 42.5 and 43.7 mol%, respectively. Phylogenetic analysis based on 16S rRNA gene sequences indicated that the two strains belonged to the family 'Flexibacteraceae' of the phylum Bacteroidetes. 16S rRNA gene sequence similarity between strains UST030701-097T and UST030701-084T was 95.0 %; their closest relative was [Marinicola] seohaensis, with 93.3 % and 96.0 % sequence similarity, respectively. Phylogenetic tree topology indicated that the two strains belonged to the same lineage, but were on separate branches. Whilst strain UST030701-084T and [Marinicola] seohaensis were found on one branch, strain UST030701-097T was in another branch that had no species with validly published names. Based on the polyphasic taxonomic data obtained in the present study, we propose that strain UST030701-097T represents a novel genus and that strain UST030701-084T represents a novel species in the phylum Bacteroidetes. The genus Fabibacter gen. nov. is proposed, with strain UST030701-097T (=NRRL B-41220T=JCM 13334T) as the type strain of the type species, Fabibacter halotolerans sp. nov. Strain UST030701-084T (=NRRL B-41219T=JCM 13337T) is proposed as the type strain of Roseivirga spongicola sp. nov. In an earlier study, it was suggested that the genus Marinicola is a later heterotypic synonym of the genus Roseivirga. However, a formal proposal to reclassify [Marinicola] seohaensis, the only member of the genus Marinicola, has not yet been made. The results of phylogenetic analyses in this study support the reclassification of [Marinicola] seohaensis as Roseivirga seohaensis comb. nov.

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Year:  2006        PMID: 16627655     DOI: 10.1099/ijs.0.64104-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  11 in total

1.  Pyrosequencing reveals diverse and distinct sponge-specific microbial communities in sponges from a single geographical location in Irish waters.

Authors:  Stephen A Jackson; Jonathan Kennedy; John P Morrissey; Fergal O'Gara; Alan D W Dobson
Journal:  Microb Ecol       Date:  2012-01-28       Impact factor: 4.552

2.  Analysis of 1,000 Type-Strain Genomes Improves Taxonomic Classification of Bacteroidetes.

Authors:  Marina García-López; Jan P Meier-Kolthoff; Brian J Tindall; Sabine Gronow; Tanja Woyke; Nikos C Kyrpides; Richard L Hahnke; Markus Göker
Journal:  Front Microbiol       Date:  2019-09-23       Impact factor: 5.640

3.  Conserved Pigment Profiles in Phylogenetically Diverse Symbiotic Bacteria Associated with the Corals Montastraea cavernosa and Mussismilia braziliensis.

Authors:  Tooba Varasteh; Lidilhone Hamerski; Diogo Tschoeke; Arthur Silva Lima; Gizele Garcia; Carlos Alberto Nunes Cosenza; Cristiane Thompson; Fabiano Thompson
Journal:  Microb Ecol       Date:  2020-07-18       Impact factor: 4.552

4.  Algivirga pacifica gen. nov., sp. nov., a novel agar-degrading marine bacterium of the family Flammeovirgaceae isolated from Micronesia.

Authors:  Jennifer Jooyoun Kim; Ji Hyung Kim; Young-Kyung Kwon; Kae Kyoung Kwon; Sung-Hyun Yang; Jiyi Jang; Soo-Jin Heo; Heung-Sik Park; Won-Kyo Jung; Youngdeuk Lee; Do-Hyung Kang; Chulhong Oh
Journal:  Curr Microbiol       Date:  2013-08-02       Impact factor: 2.188

5.  Mooreia alkaloidigena gen. nov., sp. nov. and Catalinimonas alkaloidigena gen. nov., sp. nov., alkaloid-producing marine bacteria in the proposed families Mooreiaceae fam. nov. and Catalimonadaceae fam. nov. in the phylum Bacteroidetes.

Authors:  Eun Ju Choi; Deanna S Beatty; Lauren A Paul; William Fenical; Paul R Jensen
Journal:  Int J Syst Evol Microbiol       Date:  2012-06-29       Impact factor: 2.747

6.  Antibacterial and antilarval-settlement potential and metabolite profiles of novel sponge-associated marine bacteria.

Authors:  Swagatika Dash; Cuili Jin; On On Lee; Ying Xu; Pei-Yuan Qian
Journal:  J Ind Microbiol Biotechnol       Date:  2009-05-27       Impact factor: 3.346

7.  Draft Genome Sequences of Two Fabibacter sp. Strains Isolated from Coastal Surface Water of Aburatsubo Inlet, Japan.

Authors:  Ryo Kaneko; Shu-Kuan Wong; Yoshitoshi Ogura; Tetsuya Hayashi; Susumu Yoshizawa; Koji Hamasaki
Journal:  Genome Announc       Date:  2016-12-08

8.  Genome-Based Taxonomic Classification of Bacteroidetes.

Authors:  Richard L Hahnke; Jan P Meier-Kolthoff; Marina García-López; Supratim Mukherjee; Marcel Huntemann; Natalia N Ivanova; Tanja Woyke; Nikos C Kyrpides; Hans-Peter Klenk; Markus Göker
Journal:  Front Microbiol       Date:  2016-12-20       Impact factor: 5.640

9.  Bacterial avidins are a widely distributed protein family in Actinobacteria, Proteobacteria and Bacteroidetes.

Authors:  Olli H Laitinen; Tanja P Kuusela; Sampo Kukkurainen; Anssi Nurminen; Aki Sinkkonen; Vesa P Hytönen
Journal:  BMC Ecol Evol       Date:  2021-04-09

10.  Three Novel Bacteria Associated with Two Centric Diatom Species from the Mediterranean Sea, Thalassiosira rotula and Skeletonema marinoi.

Authors:  Federica Di Costanzo; Valeria Di Dato; Leonardo Joaquim van Zyl; Adele Cutignano; Francesco Esposito; Marla Trindade; Giovanna Romano
Journal:  Int J Mol Sci       Date:  2021-12-07       Impact factor: 5.923

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