Literature DB >> 16627638

Sandarakinotalea sediminis gen. nov., sp. nov., a novel member of the family Flavobacteriaceae.

Shams Tabrez Khan1, Yasuyoshi Nakagawa1, Shigeaki Harayama1.   

Abstract

Four Gram-negative, orange-coloured, aerobic, heterotrophic bacteria were isolated from sediment samples collected on the Pacific coast of Japan near the cities of Toyohashi and Katsuura. 16S rRNA gene sequence analysis indicated that these strains form a distinct lineage within the family Flavobacteriaceae. The four isolates shared 99.9-100 % 16S rRNA gene sequence similarity with each other and showed 88-90.9 % similarity with their neighbours in the family Flavobacteriaceae. The four strains also shared high DNA-DNA reassociation values of 67-99 % with each other. All the strains grew at 37 degrees C but not at 4 degrees C, and degraded gelatin, starch and DNA. The major fatty acids were i-C15:0, a-C15:0, i-C16:0 and i-C17:0 3-OH. However, two common fatty acids of members of the Flavobacteriaceae, i-C15:1 and a-C15:1, were absent in these strains. The DNA G+C contents of the four strains were in the range 35-37 mol%. On the basis of the polyphasic evidence, it was concluded that these strains should be classified as a novel genus and a novel species in the family Flavobacteriaceae, for which the name Sandarakinotalea sediminis gen. nov., sp. nov. is proposed. The type strain of Sandarakinotalea sediminis is CKA-5T (=NBRC 100970T=LMG 23247T).

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Year:  2006        PMID: 16627638     DOI: 10.1099/ijs.0.64055-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  2 in total

1.  Comparative genome analysis of the Flavobacteriales bacterium strain UJ101, isolated from the gut of Atergatis reticulatus.

Authors:  Jhung-Ahn Yang; Sung-Hyun Yang; Junghee Kim; Kae Kyoung Kwon; Hyun-Myung Oh
Journal:  J Microbiol       Date:  2017-06-30       Impact factor: 3.422

2.  Draft Genome Sequences of Marine Flavobacterium Nonlabens Strains NR17, NR24, NR27, NR32, NR33, and Ara13.

Authors:  Masato Nakanishi; Pedro Meirelles; Ryohei Suzuki; Naoki Takatani; Sayaka Mino; Wataru Suda; Kenshiro Oshima; Masahira Hattori; Moriya Ohkuma; Masashi Hosokawa; Kazuo Miyashita; Fabiano L Thompson; Ako Niwa; Toko Sawabe; Tomoo Sawabe
Journal:  Genome Announc       Date:  2014-11-13
  2 in total

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