Literature DB >> 16627637

Echinicola pacifica gen. nov., sp. nov., a novel flexibacterium isolated from the sea urchin Strongylocentrotus intermedius.

Olga I Nedashkovskaya1, Seung Bum Kim2, Marc Vancanneyt3, Anatoly M Lysenko4, Dong Sung Shin2, Myung Soo Park5, Kang Hyun Lee6, Won Jin Jung6, Natalia I Kalinovskaya1, Valery V Mikhailov1, Kyung Sook Bae6, Jean Swings7,3.   

Abstract

The taxonomic position of three novel marine, heterotrophic, pigmented and agarolytic bacteria with gliding motility, isolated from the sea urchin Strongylocentrotus intermedius, was investigated. 16S rRNA gene sequence analysis revealed that strains KMM 6166, KMM 6172T and KMM 6173 are members of the phylum Bacteroidetes; their nearest neighbours were Belliella baltica and Hongiella marincola (similarities of 94.5 and 93.6 %, respectively). The DNA G+C content of the strains was 44-45 mol%. The predominant fatty acids were C15 : 0 iso, C16:1omega5c, C17:1 iso omega9c, C17:0 iso 3-OH and summed feature 3 (C16:1omega7c and/or C15:0 iso 2-OH). The major respiratory quinone was MK-7. Results of molecular experiments supported by phenotypic and chemotaxonomic data enabled the isolates to be classified as representatives of a novel species in a new genus, for which the name Echinicola pacifica gen. nov., sp. nov. is proposed. Echinicola pacifica is the type species of the genus Echinicola, and its type strain is KMM 6172T (=KCTC 12368T=LMG 23350T).

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Year:  2006        PMID: 16627637     DOI: 10.1099/ijs.0.64156-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  9 in total

1.  Isolation, Diversity and Characterization of Ulvan-Degrading Bacteria Isolated from Marine Environments.

Authors:  Reiji Tanaka; Yu Kurishiba; Hideo Miyake; Toshiyuki Shibata
Journal:  Molecules       Date:  2022-05-25       Impact factor: 4.927

2.  Evidence for sex and recombination in the choanoflagellate Salpingoeca rosetta.

Authors:  Tera C Levin; Nicole King
Journal:  Curr Biol       Date:  2013-10-17       Impact factor: 10.834

3.  The Rosetteless gene controls development in the choanoflagellate S. rosetta.

Authors:  Tera C Levin; Allison J Greaney; Laura Wetzel; Nicole King
Journal:  Elife       Date:  2014-10-09       Impact factor: 8.140

4.  Genome-Based Taxonomic Classification of Bacteroidetes.

Authors:  Richard L Hahnke; Jan P Meier-Kolthoff; Marina García-López; Supratim Mukherjee; Marcel Huntemann; Natalia N Ivanova; Tanja Woyke; Nikos C Kyrpides; Hans-Peter Klenk; Markus Göker
Journal:  Front Microbiol       Date:  2016-12-20       Impact factor: 5.640

5.  Characterization of Potential Polysaccharide Utilization Systems in the Marine Bacteroidetes Gramella Flava JLT2011 Using a Multi-Omics Approach.

Authors:  Kai Tang; Yingfan Lin; Yu Han; Nianzhi Jiao
Journal:  Front Microbiol       Date:  2017-02-14       Impact factor: 5.640

6.  Predicted glycosyltransferases promote development and prevent spurious cell clumping in the choanoflagellate S. rosetta.

Authors:  Laura A Wetzel; Tera C Levin; Ryan E Hulett; Daniel Chan; Grant A King; Reef Aldayafleh; David S Booth; Monika Abedin Sigg; Nicole King
Journal:  Elife       Date:  2018-12-17       Impact factor: 8.140

7.  Comparative genome characterization of Echinicola marina sp. nov., isolated from deep-sea sediment provide insight into carotenoid biosynthetic gene cluster evolution.

Authors:  Yu Pang; Mengru Chen; Wei Lu; Ming Chen; Yongliang Yan; Min Lin; Wei Zhang; Zhengfu Zhou
Journal:  Sci Rep       Date:  2021-12-17       Impact factor: 4.379

8.  A bacterial sulfonolipid triggers multicellular development in the closest living relatives of animals.

Authors:  Rosanna A Alegado; Laura W Brown; Shugeng Cao; Renee K Dermenjian; Richard Zuzow; Stephen R Fairclough; Jon Clardy; Nicole King
Journal:  Elife       Date:  2012-10-15       Impact factor: 8.140

9.  Transfection of choanoflagellates illuminates their cell biology and the ancestry of animal septins.

Authors:  David S Booth; Heather Szmidt-Middleton; Nicole King
Journal:  Mol Biol Cell       Date:  2018-10-03       Impact factor: 4.138

  9 in total

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