Literature DB >> 16621840

Positive selection acting on a surface membrane protein of the plant-pathogenic phytoplasmas.

Shigeyuki Kakizawa1, Kenro Oshima, Hee-Young Jung, Shiho Suzuki, Hisashi Nishigawa, Ryo Arashida, Shin-Ichi Miyata, Masashi Ugaki, Hirohisa Kishino, Shigetou Namba.   

Abstract

Phytoplasmas are plant-pathogenic bacteria that cause numerous diseases. This study shows a strong positive selection on the phytoplasma antigenic membrane protein (Amp). The ratio of nonsynonymous to synonymous substitutions was >1 with all the methods we tested. The clear positive selections imply an important biological role for Amp in host-bacterium interactions.

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Year:  2006        PMID： 16621840      PMCID： PMC1447460          DOI： 10.1128/JB.188.9.3424-3428.2006

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  19 in total

1.  Codon-substitution models for heterogeneous selection pressure at amino acid sites.

Authors:  Z Yang; R Nielsen; N Goldman; A M Pedersen
Journal:  Genetics       Date:  2000-05       Impact factor: 4.562

2.  Rapid evolution in plant chitinases: molecular targets of selection in plant-pathogen coevolution.

Authors:  J G Bishop; A M Dean; T Mitchell-Olds
Journal:  Proc Natl Acad Sci U S A       Date:  2000-05-09       Impact factor: 11.205

3.  Phylogenetic evidence for frequent positive selection and recombination in the meningococcal surface antigen PorB.

Authors:  Rachel Urwin; Edward C Holmes; Andrew J Fox; Jeremy P Derrick; Martin C J Maiden
Journal:  Mol Biol Evol       Date:  2002-10       Impact factor: 16.240

4.  Characterization of homologues of the apple proliferation immunodominant membrane protein gene from three related phytoplasmas.

Authors:  Anne Morton; David L Davies; Cheryl L Blomquist; Derek J Barbara
Journal:  Mol Plant Pathol       Date:  2003-03-01       Impact factor: 5.663

5.  Likelihood models for detecting positively selected amino acid sites and applications to the HIV-1 envelope gene.

Authors:  R Nielsen; Z Yang
Journal:  Genetics       Date:  1998-03       Impact factor: 4.562

6.  In search of molecular darwinism.

Authors:  P M Sharp
Journal:  Nature       Date:  1997-01-09       Impact factor: 49.962

7.  Episodic adaptive evolution of primate lysozymes.

Authors:  W Messier; C B Stewart
Journal:  Nature       Date:  1997-01-09       Impact factor: 49.962

8.  Positive darwinian selection observed at the variable-region genes of immunoglobulins.

Authors:  T Tanaka; M Nei
Journal:  Mol Biol Evol       Date:  1989-09       Impact factor: 16.240

9.  MEGA: Molecular Evolutionary Genetics Analysis software for microcomputers.

Authors:  S Kumar; K Tamura; M Nei
Journal:  Comput Appl Biosci       Date:  1994-04

10.  'Candidatus Phytoplasma castaneae', a novel phytoplasma taxon associated with chestnut witches' broom disease.

Authors:  Hee-Young Jung; Toshimi Sawayanagi; Shigeyuki Kakizawa; Hisashi Nishigawa; Shin-Ichi Miyata; Kenro Oshima; Masashi Ugaki; Joon-Tak Lee; Tadaaki Hibi; Shigetou Namba
Journal:  Int J Syst Evol Microbiol       Date:  2002-09       Impact factor: 2.747
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  18 in total

1.  The alteration of plant morphology by small peptides released from the proteolytic processing of the bacterial peptide TENGU.

Authors:  Kyoko Sugawara; Youhei Honma; Ken Komatsu; Misako Himeno; Kenro Oshima; Shigetou Namba
Journal:  Plant Physiol       Date:  2013-06-19       Impact factor: 8.340

2.  Decreasing global transcript levels over time suggest that phytoplasma cells enter stationary phase during plant and insect colonization.

Authors:  D Pacifico; L Galetto; M Rashidi; S Abbà; S Palmano; G Firrao; D Bosco; C Marzachì
Journal:  Appl Environ Microbiol       Date:  2015-01-30       Impact factor: 4.792

3.  Striking diversity of vmp1, a variable gene encoding a putative membrane protein of the stolbur phytoplasma.

Authors:  Agnès Cimerman; Davide Pacifico; Pascal Salar; Cristina Marzachì; Xavier Foissac
Journal:  Appl Environ Microbiol       Date:  2009-03-06       Impact factor: 4.792

4.  Comparative Genome Sequence Analysis Reveals the Extent of Diversity and Conservation for Glycan-Associated Proteins in Burkholderia spp.

Authors:  Hui San Ong; Rahmah Mohamed; Mohd Firdaus-Raih
Journal:  Comp Funct Genomics       Date:  2012-09-06

5.  The major antigenic membrane protein of "Candidatus Phytoplasma asteris" selectively interacts with ATP synthase and actin of leafhopper vectors.

Authors:  Luciana Galetto; Domenico Bosco; Raffaella Balestrini; Andrea Genre; Jacqueline Fletcher; Cristina Marzachì
Journal:  PLoS One       Date:  2011-07-25       Impact factor: 3.240

Review 6.  Current view on phytoplasma genomes and encoded metabolism.

Authors:  Michael Kube; Jelena Mitrovic; Bojan Duduk; Ralf Rabus; Erich Seemüller
Journal:  ScientificWorldJournal       Date:  2011-12-05

7.  Role of the major antigenic membrane protein in phytoplasma transmission by two insect vector species.

Authors:  Mahnaz Rashidi; Luciana Galetto; Domenico Bosco; Andrea Bulgarelli; Marta Vallino; Flavio Veratti; Cristina Marzachì
Journal:  BMC Microbiol       Date:  2015-09-30       Impact factor: 3.605

8.  'Candidatus Phytoplasma phoenicium' associated with almond witches'-broom disease: from draft genome to genetic diversity among strain populations.

Authors:  Fabio Quaglino; Michael Kube; Maan Jawhari; Yusuf Abou-Jawdah; Christin Siewert; Elia Choueiri; Hana Sobh; Paola Casati; Rosemarie Tedeschi; Marina Molino Lova; Alberto Alma; Piero Attilio Bianco
Journal:  BMC Microbiol       Date:  2015-07-30       Impact factor: 3.605

9.  Interactions between the flavescence dorée phytoplasma and its insect vector indicate lectin-type adhesion mediated by the adhesin VmpA.

Authors:  Nathalie Arricau-Bouvery; Sybille Duret; Marie-Pierre Dubrana; Delphine Desqué; Sandrine Eveillard; Lysiane Brocard; Sylvie Malembic-Maher; Xavier Foissac
Journal:  Sci Rep       Date:  2021-05-27       Impact factor: 4.379

10.  Insight into the evolution of the histidine triad protein (HTP) family in Streptococcus.

Authors:  Zhu-Qing Shao; Yan-Mei Zhang; Xiu-Zhen Pan; Bin Wang; Jian-Qun Chen
Journal:  PLoS One       Date:  2013-03-20       Impact factor: 3.240
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