Literature DB >> 16621835

Sequencing Bacillus anthracis typing phages gamma and cherry reveals a common ancestry.

Derrick E Fouts1, David A Rasko, Regina Z Cer, Lingxia Jiang, Nadia B Fedorova, Alla Shvartsbeyn, Jessica J Vamathevan, Luke Tallon, Ryan Althoff, Tamara S Arbogast, Douglas W Fadrosh, Timothy D Read, Steven R Gill.   

Abstract

The genetic relatedness of the Bacillus anthracis typing phages Gamma and Cherry was determined by nucleotide sequencing and comparative analysis. The genomes of these two phages were identical except at three variable loci, which showed heterogeneity within individual lysates and among Cherry, Wbeta, Fah, and four Gamma bacteriophage sequences.

Entities:  

Mesh:

Year:  2006        PMID: 16621835      PMCID: PMC1447464          DOI: 10.1128/JB.188.9.3402-3408.2006

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  33 in total

1.  Cloning and analysis of the capsid morphogenesis genes of Pseudomonas aeruginosa bacteriophage D3: another example of protein chain mail?

Authors:  Z A Gilakjan; A M Kropinski
Journal:  J Bacteriol       Date:  1999-12       Impact factor: 3.490

2.  Complete nucleotide sequence, molecular analysis and genome structure of bacteriophage A118 of Listeria monocytogenes: implications for phage evolution.

Authors:  M J Loessner; R B Inman; P Lauer; R Calendar
Journal:  Mol Microbiol       Date:  2000-01       Impact factor: 3.501

3.  Universal trees based on large combined protein sequence data sets.

Authors:  J R Brown; C J Douady; M J Italia; W E Marshall; M J Stanhope
Journal:  Nat Genet       Date:  2001-07       Impact factor: 38.330

Review 4.  Diversity in the serine recombinases.

Authors:  Margaret C M Smith; Helena M Thorpe
Journal:  Mol Microbiol       Date:  2002-04       Impact factor: 3.501

5.  T-Coffee: A novel method for fast and accurate multiple sequence alignment.

Authors:  C Notredame; D G Higgins; J Heringa
Journal:  J Mol Biol       Date:  2000-09-08       Impact factor: 5.469

6.  The Phage Proteomic Tree: a genome-based taxonomy for phage.

Authors:  Forest Rohwer; Rob Edwards
Journal:  J Bacteriol       Date:  2002-08       Impact factor: 3.490

7.  Phenocopy of resistance to phage W in Bacillus anthracis.

Authors:  G IVANOVICS; J LANTOS
Journal:  Acta Microbiol Acad Sci Hung       Date:  1962

8.  Improved microbial gene identification with GLIMMER.

Authors:  A L Delcher; D Harmon; S Kasif; O White; S L Salzberg
Journal:  Nucleic Acids Res       Date:  1999-12-01       Impact factor: 16.971

9.  A collagen-like surface glycoprotein is a structural component of the Bacillus anthracis exosporium.

Authors:  Patricia Sylvestre; Evelyne Couture-Tosi; Michèle Mock
Journal:  Mol Microbiol       Date:  2002-07       Impact factor: 3.501

10.  The genome sequence of Bacillus anthracis Ames and comparison to closely related bacteria.

Authors:  Timothy D Read; Scott N Peterson; Nicolas Tourasse; Les W Baillie; Ian T Paulsen; Karen E Nelson; Hervé Tettelin; Derrick E Fouts; Jonathan A Eisen; Steven R Gill; Erik K Holtzapple; Ole Andreas Okstad; Erlendur Helgason; Jennifer Rilstone; Martin Wu; James F Kolonay; Maureen J Beanan; Robert J Dodson; Lauren M Brinkac; Michelle Gwinn; Robert T DeBoy; Ramana Madpu; Sean C Daugherty; A Scott Durkin; Daniel H Haft; William C Nelson; Jeremy D Peterson; Mihai Pop; Hoda M Khouri; Diana Radune; Jonathan L Benton; Yasmin Mahamoud; Lingxia Jiang; Ioana R Hance; Janice F Weidman; Kristi J Berry; Roger D Plaut; Alex M Wolf; Kisha L Watkins; William C Nierman; Alyson Hazen; Robin Cline; Caroline Redmond; Joanne E Thwaite; Owen White; Steven L Salzberg; Brendan Thomason; Arthur M Friedlander; Theresa M Koehler; Philip C Hanna; Anne-Brit Kolstø; Claire M Fraser
Journal:  Nature       Date:  2003-05-01       Impact factor: 49.962

View more
  27 in total

1.  Geographical distribution of genotypic and phenotypic markers among Bacillus anthracis isolates and related species by historical movement and horizontal transfer.

Authors:  J L Kiel; J E Parker; E A Holwitt; R P McCreary; C J Andrews; A De Los Santos; M Wade; J Kalns; W Walker
Journal:  Folia Microbiol (Praha)       Date:  2009-04-18       Impact factor: 2.099

2.  Clostridium perfringens bacteriophages ΦCP39O and ΦCP26F: genomic organization and proteomic analysis of the virions.

Authors:  Bruce S Seal; Derrick E Fouts; Mustafa Simmons; Johnna K Garrish; Robin L Kuntz; Rebekah Woolsey; Kathleen M Schegg; Andrew M Kropinski; Hans-W Ackermann; Gregory R Siragusa
Journal:  Arch Virol       Date:  2010-10-21       Impact factor: 2.574

3.  Prevalence of Bacillus anthracis-like organisms and bacteriophages in the intestinal tract of the earthworm Eisenia fetida.

Authors:  R Schuch; A J Pelzek; S Kan; V A Fischetti
Journal:  Appl Environ Microbiol       Date:  2010-01-29       Impact factor: 4.792

4.  Bacteriophage PBC1 and its endolysin as an antimicrobial agent against Bacillus cereus.

Authors:  Minsuk Kong; Sangryeol Ryu
Journal:  Appl Environ Microbiol       Date:  2015-01-16       Impact factor: 4.792

5.  Detailed genomic analysis of the Wbeta and gamma phages infecting Bacillus anthracis: implications for evolution of environmental fitness and antibiotic resistance.

Authors:  Raymond Schuch; Vincent A Fischetti
Journal:  J Bacteriol       Date:  2006-04       Impact factor: 3.490

Review 6.  Bacillus anthracis physiology and genetics.

Authors:  Theresa M Koehler
Journal:  Mol Aspects Med       Date:  2009-08-03

7.  Phage-based platforms for the clinical detection of human bacterial pathogens.

Authors:  David A Schofield; Natasha J Sharp; Caroline Westwater
Journal:  Bacteriophage       Date:  2012-04-01

8.  Next generation sequencing technologies and the changing landscape of phage genomics.

Authors:  Jochen Klumpp; Derrick E Fouts; Shanmuga Sozhamannan
Journal:  Bacteriophage       Date:  2012-07-01

9.  Characteristics of a broad lytic spectrum endolysin from phage BtCS33 of Bacillus thuringiensis.

Authors:  Yihui Yuan; Qin Peng; Meiying Gao
Journal:  BMC Microbiol       Date:  2012-12-19       Impact factor: 3.605

10.  Natural zinc ribbon HNH endonucleases and engineered zinc finger nicking endonuclease.

Authors:  Shuang-yong Xu; Yogesh K Gupta
Journal:  Nucleic Acids Res       Date:  2012-11-03       Impact factor: 16.971

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.