Literature DB >> 16621833

Pathogenomic sequence analysis of Bacillus cereus and Bacillus thuringiensis isolates closely related to Bacillus anthracis.

Cliff S Han1, Gary Xie, Jean F Challacombe, Michael R Altherr, Smriti S Bhotika, Nancy Brown, David Bruce, Connie S Campbell, Mary L Campbell, Jin Chen, Olga Chertkov, Cathy Cleland, Mira Dimitrijevic, Norman A Doggett, John J Fawcett, Tijana Glavina, Lynne A Goodwin, Lance D Green, Karen K Hill, Penny Hitchcock, Paul J Jackson, Paul Keim, Avinash Ramesh Kewalramani, Jon Longmire, Susan Lucas, Stephanie Malfatti, Kim McMurry, Linda J Meincke, Monica Misra, Bernice L Moseman, Mark Mundt, A Christine Munk, Richard T Okinaka, B Parson-Quintana, Lee Philip Reilly, Paul Richardson, Donna L Robinson, Eddy Rubin, Elizabeth Saunders, Roxanne Tapia, Judith G Tesmer, Nina Thayer, Linda S Thompson, Hope Tice, Lawrence O Ticknor, Patti L Wills, Thomas S Brettin, Paul Gilna.   

Abstract

Bacillus anthracis, Bacillus cereus, and Bacillus thuringiensis are closely related gram-positive, spore-forming bacteria of the B. cereus sensu lato group. While independently derived strains of B. anthracis reveal conspicuous sequence homogeneity, environmental isolates of B. cereus and B. thuringiensis exhibit extensive genetic diversity. Here we report the sequencing and comparative analysis of the genomes of two members of the B. cereus group, B. thuringiensis 97-27 subsp. konkukian serotype H34, isolated from a necrotic human wound, and B. cereus E33L, which was isolated from a swab of a zebra carcass in Namibia. These two strains, when analyzed by amplified fragment length polymorphism within a collection of over 300 of B. cereus, B. thuringiensis, and B. anthracis isolates, appear closely related to B. anthracis. The B. cereus E33L isolate appears to be the nearest relative to B. anthracis identified thus far. Whole-genome sequencing of B. thuringiensis 97-27and B. cereus E33L was undertaken to identify shared and unique genes among these isolates in comparison to the genomes of pathogenic strains B. anthracis Ames and B. cereus G9241 and nonpathogenic strains B. cereus ATCC 10987 and B. cereus ATCC 14579. Comparison of these genomes revealed differences in terms of virulence, metabolic competence, structural components, and regulatory mechanisms.

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Year:  2006        PMID: 16621833      PMCID: PMC1447445          DOI: 10.1128/JB.188.9.3382-3390.2006

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  41 in total

1.  Fast algorithms for large-scale genome alignment and comparison.

Authors:  Arthur L Delcher; Adam Phillippy; Jane Carlton; Steven L Salzberg
Journal:  Nucleic Acids Res       Date:  2002-06-01       Impact factor: 16.971

2.  A novel Bacillus subtilis gene involved in negative control of sporulation and degradative-enzyme production.

Authors:  M Honjo; A Nakayama; K Fukazawa; K Kawamura; K Ando; M Hori; Y Furutani
Journal:  J Bacteriol       Date:  1990-04       Impact factor: 3.490

3.  Intra- and interspecies signaling between Streptococcus salivarius and Streptococcus pyogenes mediated by SalA and SalA1 lantibiotic peptides.

Authors:  M Upton; J R Tagg; P Wescombe; H F Jenkinson
Journal:  J Bacteriol       Date:  2001-07       Impact factor: 3.490

4.  Sequence and organization of pXO1, the large Bacillus anthracis plasmid harboring the anthrax toxin genes.

Authors:  R T Okinaka; K Cloud; O Hampton; A R Hoffmaster; K K Hill; P Keim; T M Koehler; G Lamke; S Kumano; J Mahillon; D Manter; Y Martinez; D Ricke; R Svensson; P J Jackson
Journal:  J Bacteriol       Date:  1999-10       Impact factor: 3.490

Review 5.  Bacillus thuringiensis and its pesticidal crystal proteins.

Authors:  E Schnepf; N Crickmore; J Van Rie; D Lereclus; J Baum; J Feitelson; D R Zeigler; D H Dean
Journal:  Microbiol Mol Biol Rev       Date:  1998-09       Impact factor: 11.056

6.  The genome sequence of Bacillus anthracis Ames and comparison to closely related bacteria.

Authors:  Timothy D Read; Scott N Peterson; Nicolas Tourasse; Les W Baillie; Ian T Paulsen; Karen E Nelson; Hervé Tettelin; Derrick E Fouts; Jonathan A Eisen; Steven R Gill; Erik K Holtzapple; Ole Andreas Okstad; Erlendur Helgason; Jennifer Rilstone; Martin Wu; James F Kolonay; Maureen J Beanan; Robert J Dodson; Lauren M Brinkac; Michelle Gwinn; Robert T DeBoy; Ramana Madpu; Sean C Daugherty; A Scott Durkin; Daniel H Haft; William C Nelson; Jeremy D Peterson; Mihai Pop; Hoda M Khouri; Diana Radune; Jonathan L Benton; Yasmin Mahamoud; Lingxia Jiang; Ioana R Hance; Janice F Weidman; Kristi J Berry; Roger D Plaut; Alex M Wolf; Kisha L Watkins; William C Nierman; Alyson Hazen; Robin Cline; Caroline Redmond; Joanne E Thwaite; Owen White; Steven L Salzberg; Brendan Thomason; Arthur M Friedlander; Theresa M Koehler; Philip C Hanna; Anne-Brit Kolstø; Claire M Fraser
Journal:  Nature       Date:  2003-05-01       Impact factor: 49.962

7.  Phylogenetic discovery bias in Bacillus anthracis using single-nucleotide polymorphisms from whole-genome sequencing.

Authors:  Talima Pearson; Joseph D Busch; Jacques Ravel; Timothy D Read; Shane D Rhoton; Jana M U'Ren; Tatum S Simonson; Sergey M Kachur; Rebecca R Leadem; Michelle L Cardon; Matthew N Van Ert; Lynn Y Huynh; Claire M Fraser; Paul Keim
Journal:  Proc Natl Acad Sci U S A       Date:  2004-09-03       Impact factor: 11.205

Review 8.  The hidden lifestyles of Bacillus cereus and relatives.

Authors:  G B Jensen; B M Hansen; J Eilenberg; J Mahillon
Journal:  Environ Microbiol       Date:  2003-08       Impact factor: 5.491

Review 9.  Bacillus cereus and related species.

Authors:  F A Drobniewski
Journal:  Clin Microbiol Rev       Date:  1993-10       Impact factor: 26.132

10.  Population structure and evolution of the Bacillus cereus group.

Authors:  Fergus G Priest; Margaret Barker; Les W J Baillie; Edward C Holmes; Martin C J Maiden
Journal:  J Bacteriol       Date:  2004-12       Impact factor: 3.490

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  92 in total

1.  Ability of Bacillus cereus group strains to cause food poisoning varies according to phylogenetic affiliation (groups I to VII) rather than species affiliation.

Authors:  Marie-Hélène Guinebretière; Philippe Velge; Olivier Couvert; Frédéric Carlin; Marie-Laure Debuyser; Christophe Nguyen-The
Journal:  J Clin Microbiol       Date:  2010-07-21       Impact factor: 5.948

2.  Inference of homologous recombination in bacteria using whole-genome sequences.

Authors:  Xavier Didelot; Daniel Lawson; Aaron Darling; Daniel Falush
Journal:  Genetics       Date:  2010-10-05       Impact factor: 4.562

3.  Weak transcription of the cry1Ac gene in nonsporulating Bacillus thuringiensis cells.

Authors:  Hui Yang; Pinshu Wang; Qi Peng; Rong Rong; Chunxia Liu; Didier Lereclus; Jie Zhang; Fuping Song; Dafang Huang
Journal:  Appl Environ Microbiol       Date:  2012-07-06       Impact factor: 4.792

4.  Air-liquid interface biofilms of Bacillus cereus: formation, sporulation, and dispersion.

Authors:  Janneke G E Wijman; Patrick P L A de Leeuw; Roy Moezelaar; Marcel H Zwietering; Tjakko Abee
Journal:  Appl Environ Microbiol       Date:  2007-01-05       Impact factor: 4.792

5.  Guidelines for nomenclature assignment of Ger receptors.

Authors:  Christian A Ross; Ernesto Abel-Santos
Journal:  Res Microbiol       Date:  2010-09-24       Impact factor: 3.992

6.  The redox regulator Fnr is required for fermentative growth and enterotoxin synthesis in Bacillus cereus F4430/73.

Authors:  Assia Zigha; Eric Rosenfeld; Philippe Schmitt; Catherine Duport
Journal:  J Bacteriol       Date:  2007-01-26       Impact factor: 3.490

7.  In silico comparison of bacterial strains using mutual information.

Authors:  D Swati
Journal:  J Biosci       Date:  2007-09       Impact factor: 1.826

8.  Genetic diversity analysis reveals that geographical environment plays a more important role than rice cultivar in Villosiclava virens population selection.

Authors:  Fei Wang; Shu Zhang; Mei-Gang Liu; Xian-Song Lin; Hui-Jiang Liu; You-Liang Peng; Yang Lin; Jun-Bin Huang; Chao-Xi Luo
Journal:  Appl Environ Microbiol       Date:  2014-02-28       Impact factor: 4.792

9.  Complete genome sequence of Macrococcus caseolyticus strain JCSCS5402, [corrected] reflecting the ancestral genome of the human-pathogenic staphylococci.

Authors:  Tadashi Baba; Kyoko Kuwahara-Arai; Ikuo Uchiyama; Fumihiko Takeuchi; Teruyo Ito; Keiichi Hiramatsu
Journal:  J Bacteriol       Date:  2008-12-12       Impact factor: 3.490

10.  A Bacillus anthracis-based in vitro system supports replication of plasmid pXO2 as well as rolling-circle-replicating plasmids.

Authors:  Eowyn Tinsley; Saleem A Khan
Journal:  Appl Environ Microbiol       Date:  2007-06-15       Impact factor: 4.792

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