Literature DB >> 16621570

Why is metabolic labour divided in nitrification?

Engràcia Costa1, Julio Pérez, Jan-Ulrich Kreft.   

Abstract

Winogradsky discovered in 1890 that nitrification is carried out in two consecutive steps by two distinct groups of bacteria: ammonia-oxidizing bacteria and nitrite-oxidizing bacteria. An explanation for this division of labour is offered based on the kinetic theory of optimal design of metabolic pathways, which postulates the existence of an optimal length for a pathway that maximizes the rate of ATP production. Shortening long pathways could, therefore, increase growth rate. However, this would reduce growth yield if the shorter pathway has fewer ATP-generating steps. High yields would be advantageous when bacteria grow in clonal clusters, as is typical for biofilms. It is postulated that bacteria that completely oxidize ammonia to nitrate exist in such environments.

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Year:  2006        PMID: 16621570     DOI: 10.1016/j.tim.2006.03.006

Source DB:  PubMed          Journal:  Trends Microbiol        ISSN: 0966-842X            Impact factor:   17.079


  72 in total

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Journal:  Nature       Date:  2015-12-24       Impact factor: 49.962

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Journal:  ISME J       Date:  2016-01-15       Impact factor: 10.302

3.  Metabolic specialization and the assembly of microbial communities.

Authors:  David R Johnson; Felix Goldschmidt; Elin E Lilja; Martin Ackermann
Journal:  ISME J       Date:  2012-05-17       Impact factor: 10.302

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Authors:  Deyong Li; Fang Fang; Guoqiang Liu
Journal:  Appl Environ Microbiol       Date:  2021-05-11       Impact factor: 4.792

5.  Use of game-theoretical methods in biochemistry and biophysics.

Authors:  Stefan Schuster; Jan-Ulrich Kreft; Anja Schroeter; Thomas Pfeiffer
Journal:  J Biol Phys       Date:  2008-08-06       Impact factor: 1.365

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Journal:  Microb Ecol       Date:  2014-10-26       Impact factor: 4.552

7.  Microbial catabolic activities are naturally selected by metabolic energy harvest rate.

Authors:  Rebeca González-Cabaleiro; Irina D Ofiţeru; Juan M Lema; Jorge Rodríguez
Journal:  ISME J       Date:  2015-07-10       Impact factor: 10.302

8.  Bacterial evolution: Genomics of metabolic trade-offs.

Authors:  Martin F Polz; Otto X Cordero
Journal:  Nat Microbiol       Date:  2016-10-26       Impact factor: 17.745

9.  Ubiquity and Diversity of Complete Ammonia Oxidizers (Comammox).

Authors:  Fei Xia; Jian-Gong Wang; Ting Zhu; Bin Zou; Sung-Keun Rhee; Zhe-Xue Quan
Journal:  Appl Environ Microbiol       Date:  2018-11-30       Impact factor: 4.792

10.  Nitrite oxidation in the upper water column and oxygen minimum zone of the eastern tropical North Pacific Ocean.

Authors:  J Michael Beman; Joy Leilei Shih; Brian N Popp
Journal:  ISME J       Date:  2013-06-27       Impact factor: 10.302

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