Literature DB >> 16621512

Rice Cluster I methanogens, an important group of Archaea producing greenhouse gas in soil.

Ralf Conrad1, Christoph Erkel, Werner Liesack.   

Abstract

Methane, which is an important greenhouse gas, is to a large part produced by methanogenic archaea in anoxic soils and sediments. Rice Cluster I methanogens have been characterized on the basis of their 16S rRNA and mcrA gene sequences, and were found to form a separate lineage within the phylogenetic radiation of Methanosarcinales and Methanomicrobiales. As isolation has not been achieved until recently, our knowledge of distribution, physiology and environmental significance of Rice Cluster I is solely based on molecular biology techniques. Rice Cluster I seems to be widely distributed, particularly in rice fields, possibly occupying different niches among the methane producers. One niche seems to be methane production on roots driven by plant photosynthesis, contributing substantially to the release of methane from rice fields into the atmosphere.

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Year:  2006        PMID: 16621512     DOI: 10.1016/j.copbio.2006.04.002

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  22 in total

1.  The archaeon Methanosarcina acetivorans contains a protein disulfide reductase with an iron-sulfur cluster.

Authors:  Daniel J Lessner; James G Ferry
Journal:  J Bacteriol       Date:  2007-08-03       Impact factor: 3.490

2.  Cultivation of methanogens under low-hydrogen conditions by using the coculture method.

Authors:  Sanae Sakai; Hiroyuki Imachi; Yuji Sekiguchi; I-Cheng Tseng; Akiyoshi Ohashi; Hideki Harada; Yoichi Kamagata
Journal:  Appl Environ Microbiol       Date:  2009-05-22       Impact factor: 4.792

Review 3.  Cell surface structures of archaea.

Authors:  Sandy Y M Ng; Behnam Zolghadr; Arnold J M Driessen; Sonja-Verena Albers; Ken F Jarrell
Journal:  J Bacteriol       Date:  2008-07-11       Impact factor: 3.490

4.  MiSeq HV4 16S rRNA gene analysis of bacterial community composition among the cave sediments of Indo-Burma biodiversity hotspot.

Authors:  Surajit De Mandal; Amrita Kumari Panda; Satpal Singh Bisht; Nachimuthu Senthil Kumar
Journal:  Environ Sci Pollut Res Int       Date:  2016-03-14       Impact factor: 4.223

5.  Shifts of methanogenic communities in response to permafrost thaw results in rising methane emissions and soil property changes.

Authors:  Shiping Wei; Hongpeng Cui; Youhai Zhu; Zhenquan Lu; Shouji Pang; Shuai Zhang; Hailiang Dong; Xin Su
Journal:  Extremophiles       Date:  2018-02-10       Impact factor: 2.395

6.  Identification of acetate-assimilating microorganisms under methanogenic conditions in anoxic rice field soil by comparative stable isotope probing of RNA.

Authors:  Tomoyuki Hori; Matthias Noll; Yasuo Igarashi; Michael W Friedrich; Ralf Conrad
Journal:  Appl Environ Microbiol       Date:  2006-10-27       Impact factor: 4.792

7.  Characterization of the bacterial and archaeal communities in rice field soils subjected to long-term fertilization practices.

Authors:  Jae-Hyung Ahn; Jaekyeong Song; Byung-Yong Kim; Myung-Sook Kim; Jae-Ho Joa; Hang-Yeon Weon
Journal:  J Microbiol       Date:  2012-11-04       Impact factor: 3.422

8.  Mercury methylation by the methanogen Methanospirillum hungatei.

Authors:  Ri-Qing Yu; John R Reinfelder; Mark E Hines; Tamar Barkay
Journal:  Appl Environ Microbiol       Date:  2013-08-09       Impact factor: 4.792

9.  Response of a rice paddy soil methanogen to syntrophic growth as revealed by transcriptional analyses.

Authors:  Pengfei Liu; Yanxiang Yang; Zhe Lü; Yahai Lu
Journal:  Appl Environ Microbiol       Date:  2014-08       Impact factor: 4.792

10.  More than 200 genes required for methane formation from H₂ and CO₂ and energy conservation are present in Methanothermobacter marburgensis and Methanothermobacter thermautotrophicus.

Authors:  Anne-Kristin Kaster; Meike Goenrich; Henning Seedorf; Heiko Liesegang; Antje Wollherr; Gerhard Gottschalk; Rudolf K Thauer
Journal:  Archaea       Date:  2011-04-27       Impact factor: 3.273

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