Literature DB >> 16618109

Characterization of human saposins by NMR spectroscopy.

Michael John1, Michaela Wendeler, Markus Heller, Konrad Sandhoff, Horst Kessler.   

Abstract

Saposins are lipid-binding and membrane-perturbing glycoproteins of the mammalian lysosomes involved in sphingolipid and membrane digestion. Although the four human saposins (Saps), A-D, are sequence-related, they are responsible for the activation of different steps in the cascade of lysosomal glycosphingolipid degradation. Saposin activity is maximal under acidic conditions, and the pH dependence of lipid and membrane binding has been assigned to conformational variability. We have employed solution NMR spectroscopy to all four (15)N-labeled human saposins at both neutral and acidic pH. Using backbone NOEs and residual dipolar couplings, the "saposin fold" comprising five alpha-helices was confirmed for Sap-A, Sap-C, and Sap-D. Structural variations within these proteins are in the order of variations between the known structures of Sap-C and NK-lysin. In contrast, Sap-B yielded spectra of very poor quality, presumably due to conformational heterogeneity and molecular association. Sap-D exists in a slow dynamic equilibrium of two conformational states with yet unknown function. At pH 4.0, where all saposins are highly unstable, Sap-C undergoes a transition to a specific dimeric state, which is likely to resemble the structure recently found in both Sap-C in a detergent environment and crystals of Sap-B.

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Year:  2006        PMID: 16618109     DOI: 10.1021/bi051944+

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  16 in total

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Journal:  J Biomol NMR       Date:  2007-01-19       Impact factor: 2.835

Review 3.  The biophysical function of pulmonary surfactant.

Authors:  Sandra Rugonyi; Samares C Biswas; Stephen B Hall
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4.  Evaluation of 2-thioxo-2,3,5,6,7,8-hexahydropyrimido[4,5-d]pyrimidin-4(1H)-one analogues as GAA activators.

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Journal:  Eur J Med Chem       Date:  2010-02-01       Impact factor: 6.514

5.  Conformational folding and stability of the HET-C2 glycolipid transfer protein fold: does a molten globule-like state regulate activity?

Authors:  Roopa Kenoth; Ravi Kanth Kamlekar; Dhirendra K Simanshu; Yongguang Gao; Lucy Malinina; Franklyn G Prendergast; Julian G Molotkovsky; Dinshaw J Patel; Sergei Y Venyaminov; Rhoderick E Brown
Journal:  Biochemistry       Date:  2011-05-19       Impact factor: 3.162

6.  Evaluation of quinazoline analogues as glucocerebrosidase inhibitors with chaperone activity.

Authors:  Juan J Marugan; Wei Zheng; Omid Motabar; Noel Southall; Ehud Goldin; Wendy Westbroek; Barbara K Stubblefield; Ellen Sidransky; Ronald A Aungst; Wendy A Lea; Anton Simeonov; William Leister; Christopher P Austin
Journal:  J Med Chem       Date:  2011-01-20       Impact factor: 7.446

Review 7.  The role of saposin C in Gaucher disease.

Authors:  Rafael J Tamargo; Arash Velayati; Ehud Goldin; Ellen Sidransky
Journal:  Mol Genet Metab       Date:  2012-05-05       Impact factor: 4.797

8.  Discovery of a novel noniminosugar acid α glucosidase chaperone series.

Authors:  Jingbo Xiao; Wendy Westbroek; Omid Motabar; Wendy A Lea; Xin Hu; Arash Velayati; Wei Zheng; Noel Southall; Ann Marie Gustafson; Ehud Goldin; Ellen Sidransky; Ke Liu; Anton Simeonov; Rafael J Tamargo; Antonia Ribes; Leslie Matalonga; Marc Ferrer; Juan J Marugan
Journal:  J Med Chem       Date:  2012-08-17       Impact factor: 7.446

9.  Detection of ligand binding hot spots on protein surfaces via fragment-based methods: application to DJ-1 and glucocerebrosidase.

Authors:  Melissa R Landon; Raquel L Lieberman; Quyen Q Hoang; Shulin Ju; Jose M M Caaveiro; Susan D Orwig; Dima Kozakov; Ryan Brenke; Gwo-Yu Chuang; Dmitry Beglov; Sandor Vajda; Gregory A Petsko; Dagmar Ringe
Journal:  J Comput Aided Mol Des       Date:  2009-06-12       Impact factor: 3.686

10.  Specific saposin C deficiency: CNS impairment and acid beta-glucosidase effects in the mouse.

Authors:  Ying Sun; Huimin Ran; Matt Zamzow; Kazuyuki Kitatani; Matthew R Skelton; Michael T Williams; Charles V Vorhees; David P Witte; Yusuf A Hannun; Gregory A Grabowski
Journal:  Hum Mol Genet       Date:  2009-12-16       Impact factor: 6.150

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