Literature DB >> 16612584

Proteins as micro viscosimeters: Brownian motion revisited.

Daniel Lavalette1, Mark A Hink, Martine Tourbez, Catherine Tétreau, Antonie J Visser.   

Abstract

Translational and rotational diffusion coefficients of proteins in solution strongly deviate from the Stokes-Einstein laws when the ambient viscosity is induced by macromolecular co-solutes rather than by a solvent of negligible size as was assumed by A. Einstein one century ago for deriving the laws of Brownian motion and diffusion. Rotational and translational motions experience different micro viscosities and both become a function of the size ratio of protein and macromolecular co-solute. Possible consequences upon fluorescence spectroscopy observations of diffusing proteins within living cells are discussed.

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Year:  2006        PMID： 16612584     DOI： 10.1007/s00249-006-0060-z

Source DB:  PubMed          Journal:  Eur Biophys J        ISSN： 0175-7571            Impact factor:   1.733


  13 in total

1.  Structural dynamics of green fluorescent protein alone and fused with a single chain Fv protein.

Authors:  M A Hink; R A Griep; J W Borst; A van Hoek; M H Eppink; A Schots; A J Visser
Journal:  J Biol Chem       Date:  2000-06-09       Impact factor: 5.157

Review 2.  Macromolecular crowding: obvious but underappreciated.

Authors:  R J Ellis
Journal:  Trends Biochem Sci       Date:  2001-10       Impact factor: 13.807

3.  Global analysis of fluorescence fluctuation data.

Authors:  Victor V Skakun; Mark A Hink; Anatoli V Digris; Ruchira Engel; Eugene G Novikov; Vladimir V Apanasovich; Antonie J W G Visser
Journal:  Eur Biophys J       Date:  2005-02-12       Impact factor: 1.733

4.  Hard quasispherical model for the viscosity of hemoglobin solutions.

Authors:  P D Ross; A P Minton
Journal:  Biochem Biophys Res Commun       Date:  1977-06-20       Impact factor: 3.575

5.  Hindered diffusion of inert tracer particles in the cytoplasm of mouse 3T3 cells.

Authors:  K Luby-Phelps; P E Castle; D L Taylor; F Lanni
Journal:  Proc Natl Acad Sci U S A       Date:  1987-07       Impact factor: 11.205

6.  Rotational relaxation of 70S ribosomes by a depolarization method using triplet probes.

Authors:  D Lavalette; B Amand; F Pochon
Journal:  Proc Natl Acad Sci U S A       Date:  1977-04       Impact factor: 11.205

7.  Tracer diffusion of globular proteins in concentrated protein solutions.

Authors:  N Muramatsu; A P Minton
Journal:  Proc Natl Acad Sci U S A       Date:  1988-05       Impact factor: 11.205

8.  Rotational relaxation of free and protease-bound alpha2-macroglobulin.

Authors:  F Pochon; B Amand; D Lavalette; J Bieth
Journal:  J Biol Chem       Date:  1978-10-25       Impact factor: 5.157

9.  Evidence for rotational contribution to protein-facilitated proton transport.

Authors:  G Gros; D Lavalette; W Moll; H Gros; B Amand; F Pochon
Journal:  Proc Natl Acad Sci U S A       Date:  1984-03       Impact factor: 11.205

10.  Translational diffusion of macromolecule-sized solutes in cytoplasm and nucleus.

Authors:  O Seksek; J Biwersi; A S Verkman
Journal:  J Cell Biol       Date:  1997-07-14       Impact factor: 10.539
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  16 in total

1.  Site-specific DNA structural and dynamic features revealed by nucleotide-independent nitroxide probes.

Authors:  Anna M Popova; Tamás Kálai; Kálmán Hideg; Peter Z Qin
Journal:  Biochemistry       Date:  2009-09-15       Impact factor: 3.162

Review 2.  Macromolecular interactions of the bacterial division FtsZ protein: from quantitative biochemistry and crowding to reconstructing minimal divisomes in the test tube.

Authors:  Germán Rivas; Carlos Alfonso; Mercedes Jiménez; Begoña Monterroso; Silvia Zorrilla
Journal:  Biophys Rev       Date:  2013-04-16

Review 3.  Effects of macromolecular crowding agents on protein folding in vitro and in silico.

Authors:  Alexander Christiansen; Qian Wang; Margaret S Cheung; Pernilla Wittung-Stafshede
Journal:  Biophys Rev       Date:  2013-02-19

Review 4.  Myoglobin's old and new clothes: from molecular structure to function in living cells.

Authors:  Gerolf Gros; Beatrice A Wittenberg; Thomas Jue
Journal:  J Exp Biol       Date:  2010-08-15       Impact factor: 3.312

5.  Direct observation of protein unfolded state compaction in the presence of macromolecular crowding.

Authors:  Therese Mikaelsson; Jörgen Adén; Lennart B-Å Johansson; Pernilla Wittung-Stafshede
Journal:  Biophys J       Date:  2013-02-05       Impact factor: 4.033

6.  Anisotropy and temperature dependence of myoglobin translational diffusion in myocardium: implication for oxygen transport and cellular architecture.

Authors:  Ping-Chang Lin; Ulrike Kreutzer; Thomas Jue
Journal:  Biophys J       Date:  2007-01-11       Impact factor: 4.033

7.  Effects of proteins on protein diffusion.

Authors:  Yaqiang Wang; Conggang Li; Gary J Pielak
Journal:  J Am Chem Soc       Date:  2010-07-14       Impact factor: 15.419

8.  Structure and membrane interaction of myristoylated ARF1.

Authors:  Yizhou Liu; Richard A Kahn; James H Prestegard
Journal:  Structure       Date:  2009-01-14       Impact factor: 5.006

9.  Neutron spin-echo studies of hemoglobin and myoglobin: multiscale internal dynamics.

Authors:  Jyotsana Lal; Peter Fouquet; Marco Maccarini; Lee Makowski
Journal:  J Mol Biol       Date:  2010-01-22       Impact factor: 5.469

10.  Macromolecular crowding and size effects on probe microviscosity.

Authors:  Aron B Goins; Hugo Sanabria; M Neal Waxham
Journal:  Biophys J       Date:  2008-09-12       Impact factor: 4.033
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