Literature DB >> 16607397

Catalytic and mechanical cycles in F-ATP synthases. Fourth in the Cycles Review Series.

Peter Dimroth1, Christoph von Ballmoos, Thomas Meier.   

Abstract

Cycles have a profound role in cellular life at all levels of organization. Well-known cycles in cell metabolism include the tricarboxylic acid and the urea cycle, in which a specific carrier substrate undergoes a sequence of chemical transformations and is regenerated at the end. Other examples include the interconversions of cofactors, such as NADH or ATP, which are present in the cell in limiting amounts and have to be recycled effectively for metabolism to continue. Every living cell performs a rapid turnover of ATP to ADP to fulfil various energetic demands and effectively regenerates the ATP from ADP in an energy-consuming process. The turnover of the ATP cycle is impressive; a human uses about its body weight in ATP per day. Enzymes perform catalytic reaction cycles in which they undergo several chemical and physical transformations before they are converted back to their original states. The ubiquitous F1F(o) ATP synthase is of particular interest not only because of its biological importance, but also owing to its unique rotational mechanism. Here, we give an overview of the membrane-embedded F(o) sector, particularly with respect to the recent crystal structure of the c ring from Ilyobacter tartaricus, and summarize current hypotheses for the mechanism by which rotation of the c ring is generated.

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Year:  2006        PMID: 16607397      PMCID: PMC1456893          DOI: 10.1038/sj.embor.7400646

Source DB:  PubMed          Journal:  EMBO Rep        ISSN: 1469-221X            Impact factor:   8.807


  43 in total

1.  Structural changes linked to proton translocation by subunit c of the ATP synthase.

Authors:  V K Rastogi; M E Girvin
Journal:  Nature       Date:  1999-11-18       Impact factor: 49.962

2.  ATP synthesis by F-type ATP synthase is obligatorily dependent on the transmembrane voltage.

Authors:  G Kaim; P Dimroth
Journal:  EMBO J       Date:  1999-08-02       Impact factor: 11.598

3.  Insights into the molecular mechanism of rotation in the Fo sector of ATP synthase.

Authors:  Aleksij Aksimentiev; Ilya A Balabin; Robert H Fillingame; Klaus Schulten
Journal:  Biophys J       Date:  2004-03       Impact factor: 4.033

4.  Torque generation by the Fo motor of the sodium ATPase.

Authors:  Jianhua Xing; Hongyun Wang; Christoph von Ballmoos; Peter Dimroth; George Oster
Journal:  Biophys J       Date:  2004-10       Impact factor: 4.033

5.  Structure of the rotor of the V-Type Na+-ATPase from Enterococcus hirae.

Authors:  Takeshi Murata; Ichiro Yamato; Yoshimi Kakinuma; Andrew G W Leslie; John E Walker
Journal:  Science       Date:  2005-03-31       Impact factor: 47.728

Review 6.  ATP synthase: an electrochemical transducer with rotatory mechanics.

Authors:  W Junge; H Lill; S Engelbrecht
Journal:  Trends Biochem Sci       Date:  1997-11       Impact factor: 13.807

7.  Membrane topography of the coupling ion binding site in Na+-translocating F1F0 ATP synthase.

Authors:  Christoph von Ballmoos; Yvonne Appoldt; Josef Brunner; Thierry Granier; Andrea Vasella; Peter Dimroth
Journal:  J Biol Chem       Date:  2001-11-21       Impact factor: 5.157

8.  Molecular architecture of the undecameric rotor of a bacterial Na+-ATP synthase.

Authors:  Janet Vonck; Tassilo Krug von Nidda; Thomas Meier; Ulrich Matthey; Deryck J Mills; Werner Kühlbrandt; Peter Dimroth
Journal:  J Mol Biol       Date:  2002-08-09       Impact factor: 5.469

9.  Voltage-generated torque drives the motor of the ATP synthase.

Authors:  G Kaim; P Dimroth
Journal:  EMBO J       Date:  1998-10-15       Impact factor: 11.598

10.  Helix packing in subunit a of the Escherichia coli ATP synthase as determined by chemical labeling and proteolysis of the cysteine-substituted protein.

Authors:  Di Zhang; Steven B Vik
Journal:  Biochemistry       Date:  2003-01-21       Impact factor: 3.162

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  54 in total

1.  Structural study on the architecture of the bacterial ATP synthase Fo motor.

Authors:  Jonna K Hakulinen; Adriana L Klyszejko; Jan Hoffmann; Luise Eckhardt-Strelau; Bernd Brutschy; Janet Vonck; Thomas Meier
Journal:  Proc Natl Acad Sci U S A       Date:  2012-06-26       Impact factor: 11.205

Review 2.  The c-Ring of the F1FO-ATP Synthase: Facts and Perspectives.

Authors:  Salvatore Nesci; Fabiana Trombetti; Vittoria Ventrella; Alessandra Pagliarani
Journal:  J Membr Biol       Date:  2015-11-30       Impact factor: 1.843

3.  Microscopic rotary mechanism of ion translocation in the F(o) complex of ATP synthases.

Authors:  Denys Pogoryelov; Alexander Krah; Julian D Langer; Özkan Yildiz; José D Faraldo-Gómez; Thomas Meier
Journal:  Nat Chem Biol       Date:  2010-10-24       Impact factor: 15.040

4.  ATP synthesis without R210 of subunit a in the Escherichia coli ATP synthase.

Authors:  Robert R Ishmukhametov; J Blake Pond; Asma Al-Huqail; Mikhail A Galkin; Steven B Vik
Journal:  Biochim Biophys Acta       Date:  2007-11-19

Review 5.  Alternative proton binding mode in ATP synthases.

Authors:  Christoph von Ballmoos
Journal:  J Bioenerg Biomembr       Date:  2007-12       Impact factor: 2.945

6.  Interaction of transmembrane helices in ATP synthase subunit a in solution as revealed by spin label difference NMR.

Authors:  Oleg Y Dmitriev; Karen H Freedman; Joseph Hermolin; Robert H Fillingame
Journal:  Biochim Biophys Acta       Date:  2007-12-15

7.  Constant c10 ring stoichiometry in the Escherichia coli ATP synthase analyzed by cross-linking.

Authors:  Britta Ballhausen; Karlheinz Altendorf; Gabriele Deckers-Hebestreit
Journal:  J Bacteriol       Date:  2009-01-30       Impact factor: 3.490

8.  Rapid detection of bacterial resistance to antibiotics using AFM cantilevers as nanomechanical sensors.

Authors:  G Longo; L Alonso-Sarduy; L Marques Rio; A Bizzini; A Trampuz; J Notz; G Dietler; S Kasas
Journal:  Nat Nanotechnol       Date:  2013-06-30       Impact factor: 39.213

9.  The past and present of sodium energetics: may the sodium-motive force be with you.

Authors:  Armen Y Mulkidjanian; Pavel Dibrov; Michael Y Galperin
Journal:  Biochim Biophys Acta       Date:  2008-04-27

10.  Correlation between the conformational states of F1-ATPase as determined from its crystal structure and single-molecule rotation.

Authors:  Daichi Okuno; Ryo Fujisawa; Ryota Iino; Yoko Hirono-Hara; Hiromi Imamura; Hiroyuki Noji
Journal:  Proc Natl Acad Sci U S A       Date:  2008-12-15       Impact factor: 11.205

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