Literature DB >> 16603409

An ecological and evolutionary context for integrated nitrogen metabolism and related signaling pathways in marine diatoms.

Andrew E Allen1, Assaf Vardi, Chris Bowler.   

Abstract

Whole-genome sequence analysis has revealed that diatoms contain genes and pathways that are novel in photosynthetic eukaryotes. More generally, the unique evolutionary footprint of the chromalveolates, which includes a genome fusion between a heterotrophic protist and a red alga in addition to a major prokaryotic influence, has fostered their inheritance of a unique complement of metabolic capabilities. Many aspects of nitrogen metabolism and cell signaling appear to be linked in diatoms. This new perspective provides a basis for understanding the ecological dominance of diatoms in contemporary oceans.

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Year:  2006        PMID: 16603409     DOI: 10.1016/j.pbi.2006.03.013

Source DB:  PubMed          Journal:  Curr Opin Plant Biol        ISSN: 1369-5266            Impact factor:   7.834


  35 in total

1.  The response of diatom central carbon metabolism to nitrogen starvation is different from that of green algae and higher plants.

Authors:  Nicola Louise Hockin; Thomas Mock; Francis Mulholland; Stanislav Kopriva; Gill Malin
Journal:  Plant Physiol       Date:  2011-11-07       Impact factor: 8.340

Review 2.  The life of diatoms in the world's oceans.

Authors:  E Virginia Armbrust
Journal:  Nature       Date:  2009-05-14       Impact factor: 49.962

3.  Evolution and metabolic significance of the urea cycle in photosynthetic diatoms.

Authors:  Andrew E Allen; Christopher L Dupont; Miroslav Oborník; Aleš Horák; Adriano Nunes-Nesi; John P McCrow; Hong Zheng; Daniel A Johnson; Hanhua Hu; Alisdair R Fernie; Chris Bowler
Journal:  Nature       Date:  2011-05-12       Impact factor: 49.962

Review 4.  Towards an understanding of the molecular regulation of carbon allocation in diatoms: the interaction of energy and carbon allocation.

Authors:  Heiko Wagner; Torsten Jakob; Andrea Fanesi; Christian Wilhelm
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2017-09-05       Impact factor: 6.237

Review 5.  Probing the evolution, ecology and physiology of marine protists using transcriptomics.

Authors:  David A Caron; Harriet Alexander; Andrew E Allen; John M Archibald; E Virginia Armbrust; Charles Bachy; Callum J Bell; Arvind Bharti; Sonya T Dyhrman; Stephanie M Guida; Karla B Heidelberg; Jonathan Z Kaye; Julia Metzner; Sarah R Smith; Alexandra Z Worden
Journal:  Nat Rev Microbiol       Date:  2016-11-21       Impact factor: 60.633

6.  Expression and inhibition of the carboxylating and decarboxylating enzymes in the photosynthetic C4 pathway of marine diatoms.

Authors:  Patrick J McGinn; François M M Morel
Journal:  Plant Physiol       Date:  2007-11-09       Impact factor: 8.340

7.  The mixed lineage nature of nitrogen transport and assimilation in marine eukaryotic phytoplankton: a case study of micromonas.

Authors:  Sarah M McDonald; Joshua N Plant; Alexandra Z Worden
Journal:  Mol Biol Evol       Date:  2010-05-09       Impact factor: 16.240

8.  Digital expression profiling of novel diatom transcripts provides insight into their biological functions.

Authors:  Uma Maheswari; Kamel Jabbari; Jean-Louis Petit; Betina M Porcel; Andrew E Allen; Jean-Paul Cadoret; Alessandra De Martino; Marc Heijde; Raymond Kaas; Julie La Roche; Pascal J Lopez; Véronique Martin-Jézéquel; Agnès Meichenin; Thomas Mock; Micaela Schnitzler Parker; Assaf Vardi; E Virginia Armbrust; Jean Weissenbach; Michaël Katinka; Chris Bowler
Journal:  Genome Biol       Date:  2010-08-25       Impact factor: 13.583

Review 9.  Carbon acquisition by diatoms.

Authors:  Karen Roberts; Espen Granum; Richard C Leegood; John A Raven
Journal:  Photosynth Res       Date:  2007-05-12       Impact factor: 3.573

10.  Marine benthic diatoms contain compounds able to induce leukemia cell death and modulate blood platelet activity.

Authors:  Siv Kristin Prestegard; Linn Oftedal; Rosie Theresa Coyne; Gyrid Nygaard; Kaja Helvik Skjaerven; Gjert Knutsen; Stein Ove Døskeland; Lars Herfindal
Journal:  Mar Drugs       Date:  2009-11-18       Impact factor: 5.118

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