Literature DB >> 16600568

Promoter motifs of olfactory receptor genes expressed in distinct topographic patterns.

Reiner Hoppe1, Heinz Breer, Joerg Strotmann.   

Abstract

Novel olfactory receptor-encoding genes that are expressed in olfactory sensory neurons arranged in a clustered pattern in the nasal epithelium, typical of the mOR262 (approved gene symbol Olfr) family, were identified. The genes share sequence motifs upstream of their transcription start sites that are highly related to those previously identified as characteristic of the mOR262 genes, suggesting that these regulatory elements may contribute to governing their unique expression pattern. Promoter analyses of genes encoding class I receptors that are expressed in the dorsal region of the epithelium revealed a different, but again common set of sequence motifs. A prominent feature of the class I gene promoters are multiple O/E-like binding sites, and O/E-type transcription factors that bind to the putative promoter region of class I OR genes were in fact identified. The findings support the concept that common elements in the promoter region of these OR genes may determine their congenic expression pattern in the epithelium.

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Year:  2006        PMID: 16600568     DOI: 10.1016/j.ygeno.2006.02.005

Source DB:  PubMed          Journal:  Genomics        ISSN: 0888-7543            Impact factor:   5.736


  14 in total

Review 1.  Achieving singularity in mammalian odorant receptor gene choice.

Authors:  Timothy S McClintock
Journal:  Chem Senses       Date:  2010-05-11       Impact factor: 3.160

2.  Homeodomain binding motifs modulate the probability of odorant receptor gene choice in transgenic mice.

Authors:  Anne Vassalli; Paul Feinstein; Peter Mombaerts
Journal:  Mol Cell Neurosci       Date:  2010-11-26       Impact factor: 4.314

3.  Ecological adaptation determines functional mammalian olfactory subgenomes.

Authors:  Sara Hayden; Michaël Bekaert; Tess A Crider; Stefano Mariani; William J Murphy; Emma C Teeling
Journal:  Genome Res       Date:  2009-12-01       Impact factor: 9.043

4.  Mapping of class I and class II odorant receptors to glomerular domains by two distinct types of olfactory sensory neurons in the mouse.

Authors:  Thomas Bozza; Anne Vassalli; Stefan Fuss; Jing-Ji Zhang; Brian Weiland; Rodrigo Pacifico; Paul Feinstein; Peter Mombaerts
Journal:  Neuron       Date:  2009-01-29       Impact factor: 17.173

5.  Emx2 stimulates odorant receptor gene expression.

Authors:  Jeremy C McIntyre; Soma C Bose; Arnold J Stromberg; Timothy S McClintock
Journal:  Chem Senses       Date:  2008-10-14       Impact factor: 3.160

6.  Rigorous and thorough bioinformatic analyses of olfactory receptor promoters confirm enrichment of O/E and homeodomain binding sites but reveal no new common motifs.

Authors:  Janet M Young; Ralf M Luche; Barbara J Trask
Journal:  BMC Genomics       Date:  2011-11-15       Impact factor: 3.969

7.  Common promoter elements in odorant and vomeronasal receptor genes.

Authors:  Jussara S Michaloski; Pedro A F Galante; Maíra H Nagai; Lucia Armelin-Correa; Ming-Shan Chien; Hiroaki Matsunami; Bettina Malnic
Journal:  PLoS One       Date:  2011-12-28       Impact factor: 3.240

8.  A Functionally Conserved Gene Regulatory Network Module Governing Olfactory Neuron Diversity.

Authors:  Qingyun Li; Scott Barish; Sumie Okuwa; Abigail Maciejewski; Alicia T Brandt; Dominik Reinhold; Corbin D Jones; Pelin Cayirlioglu Volkan
Journal:  PLoS Genet       Date:  2016-01-14       Impact factor: 5.917

9.  The Mouse Solitary Odorant Receptor Gene Promoters as Models for the Study of Odorant Receptor Gene Choice.

Authors:  Andrea Degl'Innocenti; Marta Parrilla; Bettina Harr; Meike Teschke
Journal:  PLoS One       Date:  2016-01-21       Impact factor: 3.240

10.  The human olfactory transcriptome.

Authors:  Tsviya Olender; Ifat Keydar; Jayant M Pinto; Pavlo Tatarskyy; Anna Alkelai; Ming-Shan Chien; Simon Fishilevich; Diego Restrepo; Hiroaki Matsunami; Yoav Gilad; Doron Lancet
Journal:  BMC Genomics       Date:  2016-08-11       Impact factor: 3.969

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