Literature DB >> 16598158

Comparison of the microbial diversity in cold-seep sediments from different depths in the Nankai Trough.

Shizuka Arakawa1, Takako Sato, Yasuhiko Yoshida, Ron Usami, Chiaki Kato.   

Abstract

We have investigated the molecular phylogeny of cold-seep sediments obtained from the Nankai Trough, at depths of about 600, 2,000, and 3,300 m, and compared the microbial diversity profiles of those sediments samples. The gamma-Proteobacteria that might function as sulfide oxidizers and the symbiotically related delta-Proteobacteria which might function as sulfate reducers were identified amongst the bacteria from all depths of the sediments. However, anoxic methane oxidizing archaea (ANME) and methanogens were only found in the 600 m deep sediments. These results indicated that the cold-seep microbial sulfur circulation system could be functioning in the shallow seep sediment at a depth of 600 m and the microbial activities at these sites might be more dynamic than at other deeper cold-seep sites.

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Year:  2006        PMID: 16598158     DOI: 10.2323/jgam.52.47

Source DB:  PubMed          Journal:  J Gen Appl Microbiol        ISSN: 0022-1260            Impact factor:   1.452


  6 in total

1.  Molecular analysis of the nitrogen cycle in deep-sea microorganisms from the Nankai Trough: genes for nitrification and denitrification from deep-sea environmental DNA.

Authors:  Hideyuki Tamegai; Rie Aoki; Shizuka Arakawa; Chiaki Kato
Journal:  Extremophiles       Date:  2006-10-27       Impact factor: 2.395

2.  Phylogenetic diversity and distribution of dissimilatory sulfite reductase genes from deep-sea sediment cores.

Authors:  Ryo Kaneko; Toru Hayashi; Manabu Tanahashi; Takeshi Naganuma
Journal:  Mar Biotechnol (NY)       Date:  2007-05-12       Impact factor: 3.619

3.  Molecular analysis of the diversity of sulfate-reducing and sulfur-oxidizing prokaryotes in the environment, using aprA as functional marker gene.

Authors:  Birte Meyer; Jan Kuever
Journal:  Appl Environ Microbiol       Date:  2007-10-05       Impact factor: 4.792

4.  Microbial communities in semi-consolidated carbonate sediments of the Southwest Indian Ridge.

Authors:  Jiwei Li; Xiaotong Peng; Huaiyang Zhou; Jiangtao Li; Zhilei Sun; Shun Chen
Journal:  J Microbiol       Date:  2014-02-01       Impact factor: 3.422

5.  Vertical distribution of bacterial and archaeal communities along discrete layers of a deep-sea cold sediment sample at the East Pacific Rise (approximately 13 degrees N).

Authors:  Youxun Li; Fuchao Li; Xiaowen Zhang; Song Qin; Zhigang Zeng; Hongyue Dang; Yunshan Qin
Journal:  Extremophiles       Date:  2008-04-17       Impact factor: 2.395

6.  Characterization of the Genome Feature and Toxic Capacity of a Bacillus wiedmannii Isolate From the Hydrothermal Field in Okinawa Trough.

Authors:  Yan Zhao; Chen Chen; Han-Jie Gu; Jian Zhang; Li Sun
Journal:  Front Cell Infect Microbiol       Date:  2019-10-25       Impact factor: 5.293

  6 in total

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