Literature DB >> 16596618

Permutation testing of orthogonal factorial effects in a language-processing experiment using fMRI.

John Suckling1, Matthew H Davis, Cinly Ooi, Alle Meije Wink, Jalal Fadili, Raymond Salvador, David Welchew, Levent Sendur, Vochita Maxim, Edward T Bullmore.   

Abstract

The block-paradigm of the Functional Image Analysis Contest (FIAC) dataset was analysed with the Brain Activation and Morphological Mapping software. Permutation methods in the wavelet domain were used for inference on cluster-based test statistics of orthogonal contrasts relevant to the factorial design of the study, namely: the average response across all active blocks, the main effect of speaker, the main effect of sentence, and the interaction between sentence and speaker. Extensive activation was seen with all these contrasts. In particular, different vs. same-speaker blocks produced elevated activation in bilateral regions of the superior temporal lobe and repetition suppression for linguistic materials (same vs. different-sentence blocks) in left inferior frontal regions. These are regions previously reported in the literature. Additional regions were detected in this study, perhaps due to the enhanced sensitivity of the methodology. Within-block sentence suppression was tested post-hoc by regression of an exponential decay model onto the extracted time series from the left inferior frontal gyrus, but no strong evidence of such an effect was found. The significance levels set for the activation maps are P-values at which we expect <1 false-positive cluster per image. Nominal type I error control was verified by empirical testing of a test statistic corresponding to a randomly ordered design matrix. The small size of the BOLD effect necessitates sensitive methods of detection of brain activation. Permutation methods permit the necessary flexibility to develop novel test statistics to meet this challenge.

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Year:  2006        PMID: 16596618      PMCID: PMC6871336          DOI: 10.1002/hbm.20252

Source DB:  PubMed          Journal:  Hum Brain Mapp        ISSN: 1065-9471            Impact factor:   5.038


  49 in total

1.  Identification of a pathway for intelligible speech in the left temporal lobe.

Authors:  S K Scott; C C Blank; S Rosen; R J Wise
Journal:  Brain       Date:  2000-12       Impact factor: 13.501

2.  Modulation of neural responses to speech by directing attention to voices or verbal content.

Authors:  Katharina von Kriegstein; Evelyn Eger; Andreas Kleinschmidt; Anne Lise Giraud
Journal:  Brain Res Cogn Brain Res       Date:  2003-06

Review 3.  Wavelets and statistical analysis of functional magnetic resonance images of the human brain.

Authors:  Ed Bullmore; Jalal Fadili; Michael Breakspear; Raymond Salvador; John Suckling; Michael Brammer
Journal:  Stat Methods Med Res       Date:  2003-10       Impact factor: 3.021

4.  Attentional modulation of human auditory cortex.

Authors:  Christopher I Petkov; Xiaojian Kang; Kimmo Alho; Olivier Bertrand; E William Yund; David L Woods
Journal:  Nat Neurosci       Date:  2004-05-23       Impact factor: 24.884

Review 5.  Thinking the voice: neural correlates of voice perception.

Authors:  Pascal Belin; Shirley Fecteau; Catherine Bédard
Journal:  Trends Cogn Sci       Date:  2004-03       Impact factor: 20.229

6.  Cortical activity reductions during repetition priming can result from rapid response learning.

Authors:  Ian G Dobbins; David M Schnyer; Mieke Verfaellie; Daniel L Schacter
Journal:  Nature       Date:  2004-02-29       Impact factor: 49.962

7.  Using confidence intervals in within-subject designs.

Authors:  G R Loftus; M E Masson
Journal:  Psychon Bull Rev       Date:  1994-12

8.  Characterizing stimulus-response functions using nonlinear regressors in parametric fMRI experiments.

Authors:  C Büchel; A P Holmes; G Rees; K J Friston
Journal:  Neuroimage       Date:  1998-08       Impact factor: 6.556

9.  Practice and difficulty evoke anatomically and pharmacologically dissociable brain activation dynamics.

Authors:  Ed Bullmore; John Suckling; Fernando Zelaya; Chris Long; Garry Honey; Laurence Reed; Carol Routledge; Virginia Ng; Paul Fletcher; John Brown; Steve C R Williams
Journal:  Cereb Cortex       Date:  2003-02       Impact factor: 5.357

10.  Spatiotemporal wavelet resampling for functional neuroimaging data.

Authors:  Michael Breakspear; Michael J Brammer; Ed T Bullmore; Pritha Das; Leanne M Williams
Journal:  Hum Brain Mapp       Date:  2004-09       Impact factor: 5.038

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  15 in total

1.  The Neuro/PsyGRID calibration experiment: identifying sources of variance and bias in multicenter MRI studies.

Authors:  John Suckling; Anna Barnes; Dominic Job; David Brennan; Katherine Lymer; Paola Dazzan; Tiago Reis Marques; Clare MacKay; Shane McKie; Steve R Williams; Steven C R Williams; Bill Deakin; Stephen Lawrie
Journal:  Hum Brain Mapp       Date:  2011-03-21       Impact factor: 5.038

2.  Monofractal and multifractal dynamics of low frequency endogenous brain oscillations in functional MRI.

Authors:  Alle-Meije Wink; Ed Bullmore; Anna Barnes; Frederic Bernard; John Suckling
Journal:  Hum Brain Mapp       Date:  2008-07       Impact factor: 5.038

3.  White matter abnormalities in skin picking disorder: a diffusion tensor imaging study.

Authors:  Jon E Grant; Brian L Odlaug; Adam Hampshire; Liana R N Schreiber; Samuel R Chamberlain
Journal:  Neuropsychopharmacology       Date:  2012-11-29       Impact factor: 7.853

4.  Influence of compulsivity of drug abuse on dopaminergic modulation of attentional bias in stimulant dependence.

Authors:  Karen D Ersche; Edward T Bullmore; Kevin J Craig; Shaila S Shabbir; Sanja Abbott; Ulrich Müller; Cinly Ooi; John Suckling; Anna Barnes; Barbara J Sahakian; Emilio V Merlo-Pich; Trevor W Robbins
Journal:  Arch Gen Psychiatry       Date:  2010-06

5.  Resampling methods for improved wavelet-based multiple hypothesis testing of parametric maps in functional MRI.

Authors:  Levent Sendur; John Suckling; Brandon Whitcher; Ed Bullmore
Journal:  Neuroimage       Date:  2007-06-14       Impact factor: 6.556

6.  Components of variance in a multicentre functional MRI study and implications for calculation of statistical power.

Authors:  John Suckling; David Ohlssen; Christopher Andrew; Glyn Johnson; Steven C R Williams; Martin Graves; Chi-Hua Chen; David Spiegelhalter; Ed Bullmore
Journal:  Hum Brain Mapp       Date:  2008-10       Impact factor: 5.038

7.  Hierarchical modularity in human brain functional networks.

Authors:  David Meunier; Renaud Lambiotte; Alex Fornito; Karen D Ersche; Edward T Bullmore
Journal:  Front Neuroinform       Date:  2009-10-30       Impact factor: 4.081

8.  Endogenous human brain dynamics recover slowly following cognitive effort.

Authors:  Anna Barnes; Edward T Bullmore; John Suckling
Journal:  PLoS One       Date:  2009-08-14       Impact factor: 3.240

9.  CamBAfx: Workflow Design, Implementation and Application for Neuroimaging.

Authors:  Cinly Ooi; Edward T Bullmore; Alle-Meije Wink; Levent Sendur; Anna Barnes; Sophie Achard; John Aspden; Sanja Abbott; Shigang Yue; Manfred Kitzbichler; David Meunier; Voichita Maxim; Raymond Salvador; Julian Henty; Roger Tait; Naresh Subramaniam; John Suckling
Journal:  Front Neuroinform       Date:  2009-08-28       Impact factor: 4.081

10.  Endogenous multifractal brain dynamics are modulated by age, cholinergic blockade and cognitive performance.

Authors:  John Suckling; Alle Meije Wink; Frederic A Bernard; Anna Barnes; Edward Bullmore
Journal:  J Neurosci Methods       Date:  2008-07-23       Impact factor: 2.390

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