Literature DB >> 16593488

Transitions between oscillatory modes in a glycolytic model system.

M Markus1, B Hess.   

Abstract

A glycolytic model system consisting of the enzymes phosphofructokinase (EC 2.7.1.11) and pyruvate kinase (EC 2.7.1.40) is analyzed when subject to periodic substrate addition. The calculations are performed by using detailed rate laws that have been derived for the enzymes of Escherichia coli. Due to linear relationships between the metabolite concentrations, the numerical solutions can be displayed inside a trapezium, so that the concentrations of four different metabolites are indicated along the trapezium edges. The analysis reveals a rich variety of time patterns, corresponding to different periodic, quasiperiodic, and chaotic attractors. These patterns undergo complex hysteresis loops when bifurcation parameters are slowly changed-for example, by modulating the input amplitude. By using this technique up to four attractors coexisting in phase space are found. The time patterns corresponding to coexisting attractors can be switched into one another by triggering the system with short substrate pulses. Furthermore, conditions exist at which the triggering is autonomous-i.e., self-sustained (intermittent) switchings occur. The time between these switchings can be set externally by the value of the input amplitude. For conditions in which the periods of the oscillations are in the order of minutes, the self-sustained switching-which modulates these oscillations-can be in the order of hours.

Entities:  

Year:  1984        PMID: 16593488      PMCID: PMC345596          DOI: 10.1073/pnas.81.14.4394

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  7 in total

1.  Control of oscillating glycolysis of yeast by stochastic, periodic, and steady source of substrate: a model and experimental study.

Authors:  A Boiteux; A Goldbeter; B Hess
Journal:  Proc Natl Acad Sci U S A       Date:  1975-10       Impact factor: 11.205

2.  Kinetics of the allosteric interactions of phosphofructokinase from Escherichia coli.

Authors:  D Blangy; H Buc; J Monod
Journal:  J Mol Biol       Date:  1968-01-14       Impact factor: 5.469

3.  Analysis of progress curves. Interaction of pyruvate kinase from Escherichia coli with fructose 1,6-bisphosphate and calcium ions.

Authors:  A Boiteux; M Markus; T Plesser; B Hess; M Malcovati
Journal:  Biochem J       Date:  1983-06-01       Impact factor: 3.857

Review 4.  Non-equilibrium dynamics of biochemical processes. 8. Fritz Lipmann-Vorlesung.

Authors:  B Hess
Journal:  Hoppe Seylers Z Physiol Chem       Date:  1983-01

5.  Temporal self-organization in biochemical systems: periodic behavior vs. chaos.

Authors:  A Goldbeter; O Decroly
Journal:  Am J Physiol       Date:  1983-10

6.  Birhythmicity, chaos, and other patterns of temporal self-organization in a multiply regulated biochemical system.

Authors:  O Decroly; A Goldbeter
Journal:  Proc Natl Acad Sci U S A       Date:  1982-11       Impact factor: 11.205

7.  Analysis of progress curves. Rate law of pyruvate kinase type I from Escherichia coli.

Authors:  M Markus; T Plesser; A Boiteux; B Hess; M Malcovati
Journal:  Biochem J       Date:  1980-09-01       Impact factor: 3.857

  7 in total
  5 in total

1.  Microtubule-like properties of the bacterial actin homolog ParM-R1.

Authors:  David Popp; Akihiro Narita; Lin Jie Lee; Mårten Larsson; Robert C Robinson
Journal:  J Biol Chem       Date:  2012-08-20       Impact factor: 5.157

2.  Theoretical study of a two-dimensional autocatalytic model for calcium dynamics at the extracellular fluid-bone interface.

Authors:  P Tracqui; A M Perault-Staub; G Milhaud; J F Staub
Journal:  Bull Math Biol       Date:  1987       Impact factor: 1.758

3.  On the recognition of order and disorder.

Authors:  M Markus; S C Müller; T Plesser; B Hess
Journal:  Biol Cybern       Date:  1987       Impact factor: 2.086

4.  Limit-cycle oscillations and chaos in reaction networks subject to conservation of mass.

Authors:  E Di Cera; P E Phillipson; J Wyman
Journal:  Proc Natl Acad Sci U S A       Date:  1989-01       Impact factor: 11.205

5.  Efficient transition to growth on fermentable carbon sources in Saccharomyces cerevisiae requires signaling through the Ras pathway.

Authors:  Y Jiang; C Davis; J R Broach
Journal:  EMBO J       Date:  1998-12-01       Impact factor: 11.598

  5 in total

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