Literature DB >> 16592840

Calculations of the circular dichroism of adenosine derivatives constrained in the syn form.

D W Miles1, M Farmer, H Eyring.   

Abstract

The rotational strengths of the four longer wavelength transitions, B(2u), B(1u), and the two E(1u), of adenosine derivatives constrained in the syn form have been investigated theoretically and experimentally. The theory combines a complete neglect of differential overlap version S (CNDO/S) description of the base with a generalized bond exciton method by means of a matrix method. Rotational strength wheels for these transitions showing the rotational strength as a function of the glycosidic rotational angles are presented and sector rules discussed. Similar sector rules are predicted for purine nucleoside derivatives containing the 6-amino substituent, regardless of heteroatom content at positions 1 or 3 of the base. The sector rules for the B(2u) rotational strength of purine nucleosides lacking the 6-amino substituent are strongly influenced by aza substitution. The circular dichroism spectra of 3-deazaadenosine, 8-(alpha-hydroxyisopropyl)-adenosine, and other purine nucleosides having a strong preference for the syn conformation are presented and compared with the theoretical results.

Entities:  

Year:  1980        PMID: 16592840      PMCID: PMC349623          DOI: 10.1073/pnas.77.6.3398

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  15 in total

1.  The sign of the B(2u) cotton effect and the conformation of pyrimidine and azapyrimidine nucleosides.

Authors:  B Pullman; H Berthod
Journal:  FEBS Lett       Date:  1972-02-15       Impact factor: 4.124

2.  Optical rotatory dispersion of nucleic acid derivatives. 8. The conformation of pyrimidine nucleosides in solution.

Authors:  T R Emerson; R J Swan; T L Ulbricht
Journal:  Biochemistry       Date:  1967-03       Impact factor: 3.162

3.  Theoretical interpretation of the circular dichroism of adenine nucleosides.

Authors:  C A Bush
Journal:  J Am Chem Soc       Date:  1973-01-10       Impact factor: 15.419

4.  Nucleoside conformations. XI. Solvent effects on optical properties of guanosine and its derivatives in dilute solutions.

Authors:  J M Delabar; W Guschlbauer
Journal:  J Am Chem Soc       Date:  1973-08-22       Impact factor: 15.419

5.  Electronic spectra of nucleic acid bases. I. Interpretation of the in-plane spectra with the aid of all valence electron MO-CI calculations.

Authors:  W Hug; I Tinoco
Journal:  J Am Chem Soc       Date:  1973-05-02       Impact factor: 15.419

6.  Vicinal effects on the optical activity of some adenine nucleosides.

Authors:  D W Miles; S J Hahn; R K Robins; M J Robins; H Eyring
Journal:  J Phys Chem       Date:  1968-05

7.  Circular dichroism of nucleoside derivatives. 8. Coupled oscillator calculations of molecules with fixed structure.

Authors:  W H Inskeep; D W Miles; H Eyring
Journal:  J Am Chem Soc       Date:  1970-07-01       Impact factor: 15.419

8.  Circular dichroism of nucleoside derivatives. IX. Vicinal effects on the circular dichroism of pyrimidine nucleosides.

Authors:  D W Miles; W H Inskeep; M J Robins; M W Winkley; R K Robins; H Eyring
Journal:  J Am Chem Soc       Date:  1970-07-01       Impact factor: 15.419

9.  Conformation of nucleosides: circular dichroism study on the syn-anti conformational equilibrium of 2-substituted benzimidazole nucleosides.

Authors:  D W Miles; L B Townsend; D L Miles; H Eyring
Journal:  Proc Natl Acad Sci U S A       Date:  1979-02       Impact factor: 11.205

10.  A purine nucleoside unequivocally constrained in the syn form. Crystal structure and conformation of 8-(alpha-hydroxyisopropyl)-adenosine.

Authors:  G I Birnbaum; D Shugar
Journal:  Biochim Biophys Acta       Date:  1978-02-16
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  2 in total

1.  Optical activity and electronic absorption spectra of some simple nucleosides related to cytidine and uridine: all-valence-shell molecular orbital calculations.

Authors:  D W Miles; P K Redington; D L Miles; H Eyring
Journal:  Proc Natl Acad Sci U S A       Date:  1981-12       Impact factor: 11.205

2.  2-Hydroxysorangiadenosine: Structure and Biosynthesis of a Myxobacterial Sesquiterpene-Nucleoside.

Authors:  Dorothy A Okoth; Joachim J Hug; Ronald Garcia; Cathrin Spröer; Jörg Overmann; Rolf Müller
Journal:  Molecules       Date:  2020-06-09       Impact factor: 4.411

  2 in total

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