Literature DB >> 16591582

Minimization of polypeptide energy, iii. Application of a rapid energy minimization technique to the calculation of preliminary structures of gramicidin-s.

R A Scott1, G Vanderkooi, R W Tuttle, P M Shames, H A Scheraga.   

Abstract

Year:  1967        PMID: 16591582      PMCID: PMC223821          DOI: 10.1073/pnas.58.6.2204

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


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  9 in total

1.  A crystallographic study of some derivatives of gramicidin S.

Authors:  G M SCHMIDT; D C HODGKIN; B M OUGHTON
Journal:  Biochem J       Date:  1957-04       Impact factor: 3.857

2.  Possible molecular models for gramicidin S and their relationship to present ideas of protein structure.

Authors:  D C HODGKIN; B M OUGHTON
Journal:  Biochem J       Date:  1957-04       Impact factor: 3.857

3.  Minimization of polypeptide energy. II. Preliminary structures of oxytocin, vasopressin, and an octapeptide from ribonuclease.

Authors:  K D Gibson; H A Scheraga
Journal:  Proc Natl Acad Sci U S A       Date:  1967-10       Impact factor: 11.205

4.  Minimization of polypeptide energy. I. Preliminary structures of bovine pancreatic ribonuclease S-peptide.

Authors:  K D Gibson; H A Scheraga
Journal:  Proc Natl Acad Sci U S A       Date:  1967-08       Impact factor: 11.205

5.  A proposal of standard conventions and nomenclature for the description of polypeptide conformations.

Authors:  J T Edsall; P J Flory; J C Kendrew; A M Liquori; G Némethy; G N Ramachandran; H A Scheraga
Journal:  J Mol Biol       Date:  1966-01       Impact factor: 5.469

6.  Stereochemical code of amino-acid residues: the molecular conformation of gramicidine S.

Authors:  A M Liquori; P De Santis; A L Kovacs; L Mazzarella
Journal:  Nature       Date:  1966-09-03       Impact factor: 49.962

7.  Initial attempts at a theoretical calculation of the conformation of gramicidin-S.

Authors:  G Vanderkooi; S J Leach; G Némethy; R A Scott; H A Scheraga
Journal:  Biochemistry       Date:  1966-09       Impact factor: 3.162

8.  Intramolecular forces and protein conformation.

Authors:  H A Scheraga; S J Leach; R A Scott
Journal:  Discuss Faraday Soc       Date:  1965

9.  Conformation of analysis of macromolecules. IV. Helical structures of poly-L-alanine, poly-L-valine, poly-beta-methyl-L-aspartate, poly-gamma-methyl-L-glutamate, and poly-L-tyrosine.

Authors:  T Ooi; R A Scott; G Vanderkooi; H A Scheraga
Journal:  J Chem Phys       Date:  1967-06-01       Impact factor: 3.488

  9 in total
  7 in total

1.  Atomically detailed folding simulation of the B domain of staphylococcal protein A from random structures.

Authors:  Jorge A Vila; Daniel R Ripoll; Harold A Scheraga
Journal:  Proc Natl Acad Sci U S A       Date:  2003-11-24       Impact factor: 11.205

2.  Protein folding optimization based on 3D off-lattice model via an improved artificial bee colony algorithm.

Authors:  Bai Li; Mu Lin; Qiao Liu; Ya Li; Changjun Zhou
Journal:  J Mol Model       Date:  2015-09-17       Impact factor: 1.810

3.  Intermolecular anti-parallel beta sheet: Comparison of predicted and observed conformations of gramicidin S.

Authors:  S Rackovsky; H A Scheraga
Journal:  Proc Natl Acad Sci U S A       Date:  1980-12       Impact factor: 11.205

Review 4.  Protein structure and properties.

Authors:  L Butler
Journal:  J Am Oil Chem Soc       Date:  1971-03       Impact factor: 1.849

5.  The conformation of gramicidin S: computed circular-dichroism properties.

Authors:  P M Bayley
Journal:  Biochem J       Date:  1971-12       Impact factor: 3.857

6.  Minimization of polypeptide energy. 8. Application of the deflation technique to a dipeptide.

Authors:  G M Crippen; H A Scheraga
Journal:  Proc Natl Acad Sci U S A       Date:  1969-09       Impact factor: 11.205

7.  Three-dimensional molecular models of bacterial cell wall mucopeptides (peptidoglycans).

Authors:  M V Kelemen; H J Rogers
Journal:  Proc Natl Acad Sci U S A       Date:  1971-05       Impact factor: 11.205

  7 in total

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