Literature DB >> 16585699

Oceanobacillus oncorhynchi subsp. incaldanensis subsp. nov., an alkalitolerant halophile isolated from an algal mat collected from a sulfurous spring in Campania (Italy), and emended description of Oceanobacillus oncorhynchi.

Ida Romano1, Licia Lama1, Barbara Nicolaus1, Annarita Poli1, Agata Gambacorta1, Assunta Giordano1.   

Abstract

A halophilic, alkalitolerant bacterium, strain 20AGT, was isolated from an algal mat collected from a sulfurous spring located in Santa Maria Incaldana (Mondragone, Campania Region, southern Italy). The isolate is Gram-positive, ferments several carbohydrates and has motile, rod-shaped cells that do not sporulate. The isolate grows at pH 6.5-9.5 and in 5-20 % NaCl. On the basis of 16S rRNA gene sequence similarity, the strain was shown to belong to the genus Oceanobacillus; strain 20AGT showed 96.6 % 16S rRNA gene sequence similarity to the type strain of Oceanobacillus iheyensis, DSM 14371T, and 99.5 % similarity to Oceanobacillus oncorhynchi NCIMB 14022T. Levels of DNA-DNA relatedness between strain 20AGT and O. iheyensis DSM 14371T and O. oncorhynchi NCIMB 14022T were respectively 29.4 and 59.0 %. The G+C content of the DNA of strain 20AGT was 40.1 mol%. The predominant respiratory quinone was MK-7, phosphatidylglycerol and phosphatidylcholine were the predominant polar lipids and minor phospholipids were also detected. ai-C14 : 0, ai-C15 : 0 and i-C15 : 0 were the major fatty acids. Strain 20AGT accumulated osmolytes and produced exopolysaccharide. On the basis of phenotypic characteristics, phylogenetic data and DNA-DNA relatedness data, isolate 20AGT should be designated as the type strain of a subspecies of Oceanobacillus oncorhynchi, for which the name Oceanobacillus oncorhynchi subsp incaldanensis subsp. nov. is proposed. The type strain is 20AGT (=DSM 16557T = ATCC BAA-954T).

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Year:  2006        PMID: 16585699     DOI: 10.1099/ijs.0.63575-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  11 in total

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Journal:  J Microbiol       Date:  2010-06-23       Impact factor: 3.422

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4.  Oceanobacillus halophilum sp. nov. isolated from a mangrove forest soil.

Authors:  Jia Tang; Guiqin Yang; Yueqiang Wang; Chu Wu; Shungui Zhou
Journal:  Curr Microbiol       Date:  2014-01-16       Impact factor: 2.188

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Authors:  Seo-Jung Jang; Yu-Jin Kim; Sul-Hee Lee; Young-Seo Park; Jung-Min Park; Dong-Hoon Bai
Journal:  J Microbiol       Date:  2014-07-30       Impact factor: 3.422

6.  Halophilic bacteria are colonizing the exhibition areas of the Capuchin Catacombs in Palermo, Italy.

Authors:  G Piñar; L Kraková; D Pangallo; D Piombino-Mascali; F Maixner; A Zink; K Sterflinger
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7.  Comparative Genomics of Host-Symbiont and Free-Living Oceanobacillus Species.

Authors:  Anupam Kumar Mondal; Jitendra Kumar; Rajesh Pandey; Shashank Gupta; Manoj Kumar; Gourja Bansal; Mitali Mukerji; Debasis Dash; Nar Singh Chauhan
Journal:  Genome Biol Evol       Date:  2017-05-01       Impact factor: 3.416

8.  Genome sequence of Oceanobacillus picturae strain S1, an halophilic bacterium first isolated in human gut.

Authors:  Jean-Christophe Lagier; Saber Khelaifia; Esam Ibraheem Azhar; Olivier Croce; Fehmida Bibi; Asif Ahmad Jiman-Fatani; Muhammad Yasir; Huda Ben Helaby; Catherine Robert; Pierre-Edouard Fournier; Didier Raoult
Journal:  Stand Genomic Sci       Date:  2015-10-29

9.  Oceanobacillus aidingensis sp. nov., a moderately halophilic bacterium.

Authors:  Wenyan Liu; Su Sheng Yang
Journal:  Antonie Van Leeuwenhoek       Date:  2014-03-05       Impact factor: 2.271

10.  Non-contiguous finished genome sequence and description of Oceanobacillus massiliensis sp. nov.

Authors:  Véronique Roux; Matthieu Million; Catherine Robert; Alix Magne; Didier Raoult
Journal:  Stand Genomic Sci       Date:  2013-12-15
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