Literature DB >> 16582495

Crystallization and preliminary X-ray studies of dUTPase from Mason-Pfizer monkey retrovirus.

Orsolya Barabás1, Veronika Németh, Beáta G Vértessy.   

Abstract

Deoxyuridine 5'-triphosphate nucleotidohydrolase from Mason-Pfizer monkey retrovirus (M-PMV dUTPase) is a betaretroviral member of the dUTPase enzyme family. In the mature M-PMV virion, this enzyme is present as the C-terminal domain of the fusion protein nucleocapsid-dUTPase. The homotrimeric organization characteristic of dUTPases is retained in this bifunctional fusion protein. The fusion protein supposedly plays a role in adequate localization of dUTPase activity in the vicinity of nucleic acids during reverse transcription and integration. Here, the nucleocapsid-free dUTPase (48 426 Da) was cocrystallized with a dUTP substrate analogue using the hanging-drop vapour-diffusion method. The obtained crystals belong to the primitive hexagonal space group P6(3), with unit-cell parameters a = 60.6, b = 60.6, c = 63.6 angstroms, alpha = 90, beta = 90, gamma = 120 degrees. Native and PtCl4-derivative data sets were collected using synchrotron radiation to 1.75 and 2.3 angstroms, respectively. Phasing was successfully performed by isomorphous replacement combined with anomalous scattering.

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Year:  2006        PMID: 16582495      PMCID: PMC2222558          DOI: 10.1107/S1744309106008931

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  8 in total

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Journal:  J Virol       Date:  1997-06       Impact factor: 5.103

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Authors:  Y Gao; K Kaluarachchi; D P Giedroc
Journal:  Protein Sci       Date:  1998-11       Impact factor: 6.725

6.  dUTPase and nucleocapsid polypeptides of the Mason-Pfizer monkey virus form a fusion protein in the virion with homotrimeric organization and low catalytic efficiency.

Authors:  Orsolya Barabás; Michaela Rumlová; Anna Erdei; Veronika Pongrácz; Iva Pichová; Beáta G Vértessy
Journal:  J Biol Chem       Date:  2003-07-16       Impact factor: 5.157

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Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1999-04

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Journal:  Proc Natl Acad Sci U S A       Date:  1995-08-01       Impact factor: 11.205

  8 in total
  4 in total

1.  Crystallization and preliminary X-ray analysis of three dUTPases from Gram-positive bacteria.

Authors:  Gui Lan Li; Juan Wang; Lan Fen Li; Xiao Dong Su
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2009-03-21

2.  Flexible segments modulate co-folding of dUTPase and nucleocapsid proteins.

Authors:  Veronika Németh-Pongrácz; Orsolya Barabás; Mónika Fuxreiter; István Simon; Iva Pichová; Michalea Rumlová; Helena Zábranská; Dmitri Svergun; Maxim Petoukhov; Veronika Harmat; Eva Klement; Eva Hunyadi-Gulyás; Katalin F Medzihradszky; Emese Kónya; Beáta G Vértessy
Journal:  Nucleic Acids Res       Date:  2006-12-14       Impact factor: 16.971

Review 3.  Viral dUTPases: Modulators of Innate Immunity.

Authors:  Maria Eugenia Ariza; Brandon Cox; Britney Martinez; Irene Mena-Palomo; Gloria Jeronimo Zarate; Marshall Vance Williams
Journal:  Biomolecules       Date:  2022-01-28

4.  Catalytic mechanism of α-phosphate attack in dUTPase is revealed by X-ray crystallographic snapshots of distinct intermediates, 31P-NMR spectroscopy and reaction path modelling.

Authors:  Orsolya Barabás; Veronika Németh; Andrea Bodor; András Perczel; Edina Rosta; Zoltán Kele; Imre Zagyva; Zoltán Szabadka; Vince I Grolmusz; Matthias Wilmanns; Beáta G Vértessy
Journal:  Nucleic Acids Res       Date:  2013-08-27       Impact factor: 16.971

  4 in total

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