Literature DB >> 1657878

Identification of a novel composite transposable element, Tn5280, carrying chlorobenzene dioxygenase genes of Pseudomonas sp. strain P51.

J R van der Meer1, A J Zehnder, W M de Vos.   

Abstract

Analysis of one of the regions of catabolic plasmid pP51 which encode chlorobenzene metabolism of Pseudomonas sp. strain P51 revealed that the tcbA and tcbB genes for chlorobenzene dioxygenase and dehydrogenase are located on a transposable element, Tn5280. Tn5280 showed the features of a composite bacterial transposon with iso-insertion elements (IS1066 and IS1067) at each end of the transposon oriented in an inverted position. When a 12-kb HindIII fragment of pP51 containing Tn5280 was cloned in the suicide donor plasmid pSUP202, marked with a kanamycin resistance gene, and introduced into Pseudomonas putida donor plasmid pSUP202, marked with a kanamycin resistance gene, and introduced into Pseudomonas putida KT2442, Tn5280 was found to transpose into the genome at random and in single copy. The insertion elements IS1066 and IS1067 differed in a single base apir located in the inner inverted repeat and were found to be highly homologous to a class of repetitive elements of Bradyrhizobium japonicum and distantly related to IS630 of Shigella sonnei. The presence of the catabolic genes tcbA and tcbB on Tn5280 suggests a mechanism by which gene clusters can be mobilized as gene cassettes and joined with others to form novel catabolic pathways.

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Year:  1991        PMID: 1657878      PMCID: PMC209212          DOI: 10.1128/jb.173.22.7077-7083.1991

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  42 in total

1.  Degradation of 1,2,4-trichloro- and 1,2,4,5-tetrachlorobenzene by pseudomonas strains.

Authors:  P Sander; R M Wittich; P Fortnagel; H Wilkes; W Francke
Journal:  Appl Environ Microbiol       Date:  1991-05       Impact factor: 4.792

2.  Characterization of the Pseudomonas sp. strain P51 gene tcbR, a LysR-type transcriptional activator of the tcbCDEF chlorocatechol oxidative operon, and analysis of the regulatory region.

Authors:  J R van der Meer; A C Frijters; J H Leveau; R I Eggen; A J Zehnder; W M de Vos
Journal:  J Bacteriol       Date:  1991-06       Impact factor: 3.490

3.  Cloning and characterization of a chromosomal DNA region required for growth on 2,4,5-T by Pseudomonas cepacia AC1100.

Authors:  R A Haugland; U M Sangodkar; P R Sferra; A M Chakrabarty
Journal:  Gene       Date:  1991-04       Impact factor: 3.688

4.  Improved tools for biological sequence comparison.

Authors:  W R Pearson; D J Lipman
Journal:  Proc Natl Acad Sci U S A       Date:  1988-04       Impact factor: 11.205

5.  Sequence analysis of the Pseudomonas sp. strain P51 tcb gene cluster, which encodes metabolism of chlorinated catechols: evidence for specialization of catechol 1,2-dioxygenases for chlorinated substrates.

Authors:  J R van der Meer; R I Eggen; A J Zehnder; W M de Vos
Journal:  J Bacteriol       Date:  1991-04       Impact factor: 3.490

6.  Characterization and nucleotide sequence determination of a repeat element isolated from a 2,4,5-T degrading strain of Pseudomonas cepacia.

Authors:  P H Tomasek; B Frantz; U M Sangodkar; R A Haugland; A M Chakrabarty
Journal:  Gene       Date:  1989       Impact factor: 3.688

7.  Cloning and characterization of plasmid-encoded genes for the degradation of 1,2-dichloro-, 1,4-dichloro-, and 1,2,4-trichlorobenzene of Pseudomonas sp. strain P51.

Authors:  J R van der Meer; A R van Neerven; E J de Vries; W M de Vos; A J Zehnder
Journal:  J Bacteriol       Date:  1991-01       Impact factor: 3.490

8.  Dehalogenase genes of Pseudomonas putida PP3 on chromosomally located transposable elements.

Authors:  J H Slater; A J Weightman; B G Hall
Journal:  Mol Biol Evol       Date:  1985-11       Impact factor: 16.240

9.  Genetic analysis of a transposon carrying toluene degrading genes on a TOL plasmid pWW0.

Authors:  M Tsuda; T Iino
Journal:  Mol Gen Genet       Date:  1987-12

10.  Transposition of R factor genes to bacteriophage lambda.

Authors:  D E Berg; J Davies; B Allet; J D Rochaix
Journal:  Proc Natl Acad Sci U S A       Date:  1975-09       Impact factor: 11.205

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  34 in total

Review 1.  Molecular mechanisms of genetic adaptation to xenobiotic compounds.

Authors:  J R van der Meer; W M de Vos; S Harayama; A J Zehnder
Journal:  Microbiol Rev       Date:  1992-12

2.  A proposed superfamily of transposase genes: transposon-like elements in ciliated protozoa and a common "D35E" motif.

Authors:  T G Doak; F P Doerder; C L Jahn; G Herrick
Journal:  Proc Natl Acad Sci U S A       Date:  1994-02-01       Impact factor: 11.205

3.  Genetic and biochemical analyses of the tec operon suggest a route for evolution of chlorobenzene degradation genes.

Authors:  S Beil; K N Timmis; D H Pieper
Journal:  J Bacteriol       Date:  1999-01       Impact factor: 3.490

4.  Recombination of the bph (Biphenyl) Catabolic Genes from Plasmid pWW100 and Their Deletion during Growth on Benzoate.

Authors:  G Lloyd-Jones; C de Jong; R C Ogden; W A Duetz; P A Williams
Journal:  Appl Environ Microbiol       Date:  1994-02       Impact factor: 4.792

5.  Structures of homologous composite transposons carrying cbaABC genes from Europe and North America.

Authors:  D Di Gioia; M Peel; F Fava; R C Wyndham
Journal:  Appl Environ Microbiol       Date:  1998-05       Impact factor: 4.792

6.  Natural horizontal transfer of a naphthalene dioxygenase gene between bacteria native to a coal tar-contaminated field site.

Authors:  J B Herrick; K G Stuart-Keil; W C Ghiorse; E L Madsen
Journal:  Appl Environ Microbiol       Date:  1997-06       Impact factor: 4.792

7.  Degradation of benzene, toluene, and xylene isomers by a bacterial consortium obtained from rhizosphere soil of Cyperus sp. grown in a petroleum-contaminated area.

Authors:  Diana Katherine Ortega-González; Diego Zaragoza; José Aguirre-Garrido; Hugo Ramírez-Saad; César Hernández-Rodríguez; Janet Jan-Roblero
Journal:  Folia Microbiol (Praha)       Date:  2013-04-07       Impact factor: 2.099

8.  Evolution of a pathway for chlorobenzene metabolism leads to natural attenuation in contaminated groundwater

Authors: 
Journal:  Appl Environ Microbiol       Date:  1998-11       Impact factor: 4.792

9.  Evidence for Acquisition in Nature of a Chromosomal 2,4-Dichlorophenoxyacetic Acid/(alpha)-Ketoglutarate Dioxygenase Gene by Different Burkholderia spp.

Authors:  V G Matheson; L J Forney; Y Suwa; C H Nakatsu; A J Sexstone; W E Holben
Journal:  Appl Environ Microbiol       Date:  1996-07       Impact factor: 4.792

10.  Characterization and expression of the plasmid-borne bedD gene from Pseudomonas putida ML2, which codes for a NAD+-dependent cis-benzene dihydrodiol dehydrogenase.

Authors:  K P Fong; C B Goh; H M Tan
Journal:  J Bacteriol       Date:  1996-10       Impact factor: 3.490

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