Literature DB >> 16570852

Mutagenesis at methylated CpG sequences.

G P Pfeifer1.   

Abstract

5-Methylcytosine in DNA is genetically unstable. Methylated CpG (mCpG) sequences frequently undergo mutation resulting in a general depletion of this dinucleotide sequence in mammalian genomes. In human genetic disease- and cancer-relevant genes, mCpG sequences are mutational hotspots. It is an almost universally accepted dogma that these mutations are caused by random deamination of 5-methylcytosines. However, it is plausible that mCpG transitions are not caused simply by spontaneous deamination of 5-methylcytosine in double-stranded DNA but by other processes including, for example, mCpG-specific base modification by endogenous or exogenous mutagens or, alternatively, by secondary factors operating at mCpG sequences and promoting deamination. We also discuss that mCpG sequences are favored targets for specific exogenous mutagens and carcinogens. When adjacent to another pyrimidine, 5-methylcytosine preferentially undergoes sunlight-induced pyrimidine dimer formation. Certain polycyclic aromatic hydrocarbons form guanine adducts and induce G to T transversion mutations with high selectivity at mCpG sequences.

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Year:  2006        PMID: 16570852     DOI: 10.1007/3-540-31390-7_10

Source DB:  PubMed          Journal:  Curr Top Microbiol Immunol        ISSN: 0070-217X            Impact factor:   4.291


  108 in total

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Authors:  Satish Kalari; Gerd P Pfeifer
Journal:  Adv Genet       Date:  2010       Impact factor: 1.944

Review 2.  Epigenetic changes of DNA repair genes in cancer.

Authors:  Christoph Lahtz; Gerd P Pfeifer
Journal:  J Mol Cell Biol       Date:  2011-02       Impact factor: 6.216

3.  Epigenetic regulation of TTF-I-mediated promoter-terminator interactions of rRNA genes.

Authors:  Attila Németh; Sylvain Guibert; Vijay Kumar Tiwari; Rolf Ohlsson; Gernot Längst
Journal:  EMBO J       Date:  2008-03-20       Impact factor: 11.598

4.  The mysterious presence of a 5-methylcytosine oxidase in the Drosophila genome: possible explanations.

Authors:  Thomas L Dunwell; Liam J McGuffin; Jim M Dunwell; Gerd P Pfeifer
Journal:  Cell Cycle       Date:  2013-09-19       Impact factor: 4.534

5.  MBD4-mediated glycosylase activity on a chromatin template is enhanced by acetylation.

Authors:  Toyotaka Ishibashi; Kevin So; Claire G Cupples; Juan Ausió
Journal:  Mol Cell Biol       Date:  2008-06-02       Impact factor: 4.272

Review 6.  On the sequence-directed nature of human gene mutation: the role of genomic architecture and the local DNA sequence environment in mediating gene mutations underlying human inherited disease.

Authors:  David N Cooper; Albino Bacolla; Claude Férec; Karen M Vasquez; Hildegard Kehrer-Sawatzki; Jian-Min Chen
Journal:  Hum Mutat       Date:  2011-09-02       Impact factor: 4.878

7.  Human chromosomal translocations at CpG sites and a theoretical basis for their lineage and stage specificity.

Authors:  Albert G Tsai; Haihui Lu; Sathees C Raghavan; Markus Muschen; Chih-Lin Hsieh; Michael R Lieber
Journal:  Cell       Date:  2008-12-12       Impact factor: 41.582

Review 8.  Clonal expansion in non-cancer tissues.

Authors:  Nobuyuki Kakiuchi; Seishi Ogawa
Journal:  Nat Rev Cancer       Date:  2021-02-24       Impact factor: 60.716

9.  The methylation of C/EBP β gene promoter and regulated by GATA-2 protein.

Authors:  Wan Rui; Zhang Jin; Gen Zhe; Houyan Song
Journal:  Mol Biol Rep       Date:  2012-10-14       Impact factor: 2.316

10.  The MIRA method for DNA methylation analysis.

Authors:  Tibor A Rauch; Gerd P Pfeifer
Journal:  Methods Mol Biol       Date:  2009
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