Literature DB >> 16566597

Role of conserved prolines in the structure and function of the Na+/dicarboxylate cotransporter 1, NaDC1.

Aditya D Joshi1, Ana M Pajor.   

Abstract

The Na+/dicarboxylate cotransporter 1 (NaDC1) is a low-affinity transporter for citric acid cycle intermediates such as succinate and citrate. The sequence of NaDC1 contains a number of conserved proline residues in predicted transmembrane helices (TMs) 7 and 10. These transmembrane domains are of particular importance because they may be involved in determining the substrate or cation-binding affinity in NaDC1. Four conserved proline residues in TMs 7 and 10 of rabbit NaDC1 were replaced with alanine to promote ideal alpha helix or glycine to promote free conformation, and the mutant transporters were expressed in the HRPE cell line. Mutations of prolines in TM 10 produced decreased protein expression and activity, whereas mutations of prolines in TM 7 completely abolished protein expression and activity. The chemical chaperone glycerol was found to improve the expression of the Pro-351 mutants in TM 7, suggesting that these mutants had defects in trafficking. The inactive mutant transporters at position 351 could also be rescued by the addition of a proline at a second site. For example, the P351A-F347P mutant had restored activity, although its substrate specificity was altered. We conclude that, in TM 7, Pro-327 may be of particular importance in the function of the transporter, whereas Pro-351 may affect protein targeting. The prolines in TM 10, at positions 523 and 524, may not be directly involved in the transporter function but may be necessary for maintaining structure.

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Year:  2006        PMID: 16566597      PMCID: PMC2547120          DOI: 10.1021/bi052064y

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  35 in total

1.  Topology of the Na(+)/dicarboxylate cotransporter: the N-terminus and hydrophilic loop 4 are located intracellularly.

Authors:  F F Zhang; A M Pajor
Journal:  Biochim Biophys Acta       Date:  2001-03-09

2.  Role of proline residues in the expression and function of the human noradrenaline transporter.

Authors:  F A Paczkowski; L J Bryan-Lluka
Journal:  J Neurochem       Date:  2004-01       Impact factor: 5.372

3.  Structure and mechanism of the lactose permease of Escherichia coli.

Authors:  Jeff Abramson; Irina Smirnova; Vladimir Kasho; Gillian Verner; H Ronald Kaback; So Iwata
Journal:  Science       Date:  2003-08-01       Impact factor: 47.728

4.  Proline-induced distortions of transmembrane helices.

Authors:  Frank S Cordes; Joanne N Bright; Mark S P Sansom
Journal:  J Mol Biol       Date:  2002-11-08       Impact factor: 5.469

5.  Conformationally sensitive residues in transmembrane domain 9 of the Na+/dicarboxylate co-transporter.

Authors:  A M Pajor
Journal:  J Biol Chem       Date:  2001-06-08       Impact factor: 5.157

6.  Proline residues in two tightly coupled helices of the sulphate transporter, SHST1, are important for sulphate transport.

Authors:  M C Shelden; P Loughlin; M L Tierney; S M Howitt
Journal:  Biochem J       Date:  2001-06-01       Impact factor: 3.857

Review 7.  Hinges, swivels and switches: the role of prolines in signalling via transmembrane alpha-helices.

Authors:  M S Sansom; H Weinstein
Journal:  Trends Pharmacol Sci       Date:  2000-11       Impact factor: 14.819

8.  Mutagenesis of the N-glycosylation site of hNaSi-1 reduces transport activity.

Authors:  Hongyan Li; Ana M Pajor
Journal:  Am J Physiol Cell Physiol       Date:  2003-07-16       Impact factor: 4.249

9.  Gating of shaker-type channels requires the flexibility of S6 caused by prolines.

Authors:  Alain J Labro; Adam L Raes; Iris Bellens; Natacha Ottschytsch; Dirk J Snyders
Journal:  J Biol Chem       Date:  2003-09-17       Impact factor: 5.157

10.  Use of the transport specificity ratio and cysteine-scanning mutagenesis to detect multiple substrate specificity determinants in the consensus amphipathic region of the Escherichia coli GABA (gamma-aminobutyric acid) transporter encoded by gabP.

Authors:  Steven C King; Lisa Brown-Istvan
Journal:  Biochem J       Date:  2003-12-15       Impact factor: 3.857

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  9 in total

1.  Transmembrane helix 7 in the Na+/dicarboxylate cotransporter 1 is an outer helix that contains residues critical for function.

Authors:  Ana M Pajor; Nina N Sun; Aditya D Joshi; Kathleen M Randolph
Journal:  Biochim Biophys Acta       Date:  2010-11-10

2.  Single nucleotide polymorphisms in the human Na+-dicarboxylate cotransporter affect transport activity and protein expression.

Authors:  Ana M Pajor; Nina N Sun
Journal:  Am J Physiol Renal Physiol       Date:  2010-07-07

3.  The cytosolic half of helix III forms the substrate exit route during permeation events of the sodium/bile acid cotransporter ASBT.

Authors:  Naissan Hussainzada; Tatiana Claro Da Silva; Peter W Swaan
Journal:  Biochemistry       Date:  2009-09-15       Impact factor: 3.162

4.  Mutations in the Na(+)/citrate cotransporter NaCT (SLC13A5) in pediatric patients with epilepsy and developmental delay.

Authors:  Jenna Klotz; Brenda E Porter; Claire Colas; Avner Schlessinger; Ana M Pajor
Journal:  Mol Med       Date:  2016-05-26       Impact factor: 6.354

5.  Conformational flexibility of helix VI is essential for substrate permeation of the human apical sodium-dependent bile acid transporter.

Authors:  Naissan Hussainzada; Akash Khandewal; Peter W Swaan
Journal:  Mol Pharmacol       Date:  2007-10-30       Impact factor: 4.436

6.  Influence of proline on the thermostability of the active site and membrane arrangement of transmembrane proteins.

Authors:  Alex Perálvarez-Marín; Victor A Lórenz-Fonfría; Rosana Simón-Vázquez; Maria Gomariz; Inmaculada Meseguer; Enric Querol; Esteve Padrós
Journal:  Biophys J       Date:  2008-07-25       Impact factor: 4.033

7.  Structure and mechanism of a bacterial sodium-dependent dicarboxylate transporter.

Authors:  Romina Mancusso; G Glenn Gregorio; Qun Liu; Da-Neng Wang
Journal:  Nature       Date:  2012-10-21       Impact factor: 49.962

8.  Sodium-dependent extracellular accessibility of Lys-84 in the sodium/dicarboxylate cotransporter.

Authors:  Jittima Weerachayaphorn; Ana M Pajor
Journal:  J Biol Chem       Date:  2007-05-15       Impact factor: 5.157

9.  Structure and inhibition mechanism of the human citrate transporter NaCT.

Authors:  David B Sauer; Jinmei Song; Bing Wang; Jacob K Hilton; Nathan K Karpowich; Joseph A Mindell; William J Rice; Da-Neng Wang
Journal:  Nature       Date:  2021-02-17       Impact factor: 49.962

  9 in total

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